RNA id: AMCG00008661



Basic Information


Item Value
RNA id AMCG00008661
length 414
RNA type mRNA
GC content 0.62
exon number 3
gene id AMCG00008661
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 8251854 ~ 8273688 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAACCGTTACTCGAGCCCCCGGTCCCGGTGCATTATTGATGCGGCTGCGGCTGCGGCTGCGGCTGCGGGCGTCGTGCTGCGGGGCGGGCGGGCGCGTCTCCGTCCATTCGTGGATCACCCGCGCATGCGCTGTGCTCTGAGAAACCAGCGCTCAGTGCACGAGGCGCGCTCCATCTCCcgTGAGTGCATCTCCATCCACGTTGGCCAGGCTGGTGTCCAGATTGGCAATGCCTGCTGGGAGCTCTATTGCCTGGAGCACGGGATCCAGCCTGATGGCCAGATGCCCAGCGACAAGACCATTGGAGGAGGGGATGACTCCTTCAACACCTTCTTCAGTGAGACTGGAGCGGGCAAGCACGTGCCCAGAGCTGTCTTTGTAGATCTGGAGCCCACAGTCATTGattcagaataa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU63371 lncRNA downstream 66733 8182929 ~ 8185121 (-) True AMCG00008662
TU63355 lncRNA downstream 113793 8137475 ~ 8138061 (-) True G50657
TU63341 lncRNA downstream 146252 8105372 ~ 8105602 (-) True G50647
TU63323 lncRNA downstream 147051 8005638 ~ 8104803 (-) True G50632
TU63426 lncRNA upstream 5064 8278752 ~ 8290801 (-) False G50711
TU63427 lncRNA upstream 5064 8278752 ~ 8324775 (-) True G50711
TU63433 lncRNA upstream 7527 8281215 ~ 8283597 (-) False AMCG00008668
TU63458 lncRNA upstream 83762 8357450 ~ 8360962 (-) True G50736
TU63465 lncRNA upstream 98818 8372506 ~ 8384007 (-) False G50740
AMCG00008659 mRNA downstream 7574 8231679 ~ 8244280 (-) True AMCG00008659
AMCG00008660 mRNA downstream 44677 8192252 ~ 8207177 (-) True AMCG00008660
AMCG00008662 mRNA downstream 61677 8184451 ~ 8190177 (-) False AMCG00008662
AMCG00008658 mRNA downstream 105620 8140051 ~ 8146234 (-) True AMCG00008658
AMCG00008654 mRNA downstream 176830 8037032 ~ 8075024 (-) True AMCG00008654
AMCG00008668 mRNA upstream 9672 8283360 ~ 8293486 (-) True AMCG00008668
AMCG00008669 mRNA upstream 42939 8316627 ~ 8320297 (-) True AMCG00008669
AMCG00008667 mRNA upstream 56211 8329899 ~ 8332822 (-) True AMCG00008667
AMCG00008666 mRNA upstream 59153 8332841 ~ 8356553 (-) True AMCG00008666
AMCG00008673 mRNA upstream 182829 8456517 ~ 8457954 (-) True AMCG00008673
TU63350 other downstream 116440 8134581 ~ 8135414 (-) True G50656
TU63287 other downstream 349248 7901335 ~ 7902606 (-) True G50602
TU63135 other downstream 1100382 6947889 ~ 7151472 (-) False G50476
TU63134 other downstream 1100382 7145625 ~ 7151472 (-) True G50476
TU62882 other downstream 2459270 5787750 ~ 5792584 (-) False AMCG00008608
TU63430 other upstream 18111 8291799 ~ 8294354 (-) False G50712
TU63463 other upstream 94228 8367916 ~ 8371330 (-) True G50739
TU63526 other upstream 383040 8656728 ~ 8660017 (-) True G50788
TU63794 other upstream 1117155 9390843 ~ 9393227 (-) True G51008
TU64089 other upstream 2299795 10573483 ~ 10603373 (-) False AMCG00008744

Expression Profile