RNA id: AMCG00008669


Basic Information

Item Value
RNA id AMCG00008669
length 252
RNA type mRNA
GC content 0.56
exon number 2
gene id AMCG00008669
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 8316627 ~ 8320297 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGCGAGCAGAACGAACTTACCAATGACTGTGGGCTCCAGATCTACAAAGACAGCTCTGGGCACGTGCTTGCCCGCTCCGGTCTCACTGAAGAAGGTGTTGAAGGAGTCATCCCCTCCTCCCATGGTCTTATCGCTGGGCATCTGGCCATCAGGCTGGATCCCATGCTCCAGGCAATAGAGCTCCCAGCAGGCATTGCCAATCTGGACACCAGCCTGGCCAACGTGGATGGAGATGCACTCACGCTATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU63426 lncRNA downstream 25826 8278752 ~ 8290801 (-) False G50711
TU63433 lncRNA downstream 33030 8281215 ~ 8283597 (-) False AMCG00008668
TU63371 lncRNA downstream 131506 8182929 ~ 8185121 (-) True AMCG00008662
TU63355 lncRNA downstream 178566 8137475 ~ 8138061 (-) True G50657
TU63341 lncRNA downstream 211025 8105372 ~ 8105602 (-) True G50647
TU63458 lncRNA upstream 37153 8357450 ~ 8360962 (-) True G50736
TU63465 lncRNA upstream 52209 8372506 ~ 8384007 (-) False G50740
TU63464 lncRNA upstream 59540 8379837 ~ 8384007 (-) True G50740
TU63521 lncRNA upstream 253717 8574014 ~ 8574338 (-) True G50784
TU63589 lncRNA upstream 517062 8837359 ~ 8840655 (-) True G50836
AMCG00008668 mRNA downstream 23141 8283360 ~ 8293486 (-) True AMCG00008668
AMCG00008661 mRNA downstream 42939 8251854 ~ 8273688 (-) True AMCG00008661
AMCG00008659 mRNA downstream 72347 8231679 ~ 8244280 (-) True AMCG00008659
AMCG00008660 mRNA downstream 109450 8192252 ~ 8207177 (-) True AMCG00008660
AMCG00008662 mRNA downstream 126450 8184451 ~ 8190177 (-) False AMCG00008662
AMCG00008667 mRNA upstream 9602 8329899 ~ 8332822 (-) True AMCG00008667
AMCG00008666 mRNA upstream 12544 8332841 ~ 8356553 (-) True AMCG00008666
AMCG00008673 mRNA upstream 136220 8456517 ~ 8457954 (-) True AMCG00008673
AMCG00008672 mRNA upstream 182403 8502700 ~ 8504696 (-) True AMCG00008672
AMCG00008674 mRNA upstream 230272 8550569 ~ 8565844 (-) True AMCG00008674
TU63429 other downstream 22273 8270324 ~ 8294354 (-) False G50712
TU63430 other downstream 22273 8291799 ~ 8294354 (-) False G50712
TU63428 other downstream 42112 8270324 ~ 8274515 (-) True G50712
TU63425 other downstream 47301 8269023 ~ 8269326 (-) True G50710
TU63350 other downstream 181213 8134581 ~ 8135414 (-) True G50656
TU63463 other upstream 47619 8367916 ~ 8371330 (-) True G50739
TU63526 other upstream 336431 8656728 ~ 8660017 (-) True G50788
TU63794 other upstream 1070546 9390843 ~ 9393227 (-) True G51008
TU64089 other upstream 2253186 10573483 ~ 10603373 (-) False AMCG00008744
TU64119 other upstream 2356966 10677263 ~ 10718201 (-) False AMCG00008748

Expression Profile