RNA id: AMCG00008722


Basic Information

Item Value
RNA id AMCG00008722
length 393
RNA type mRNA
GC content 0.59
exon number 3
gene id AMCG00008722
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 9692091 ~ 9695072 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGACGGGAGCCTGGCTGACTCTGATGGGGCTGGTCCTGGCTCTGGCCGGAGTGGGCAGCTCGATCAAAGAGGAGGGCTTGGAGTCCATTGAAAACCTGCAAAGCGAACCAGAGGACAATCTGACGGACCGGATAGCAGAAGCATTGGATGGTGACAAACGGATGGCGCATGGGGACGAACGCTTACTCAGCACTGTGCTGCGCTCTCTCCTACACGGACCCCAGCGATACAACCGGAGCCCTTCCTTCCTTTTCCAGCCCCAGAGGTTTGGCCGGGAAAGCAGAGGAGGCCTGGGCTTGGAGGATAGGATACAGTCCCGGGGCTGGGAGACCATCCCACCCCAGTTCTGGAGCATGGCTGTACCACAGAGATTCGGGAAGAAGAAGTGA

Function

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process
GO:0005184 neuropeptide hormone activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU63786 lncRNA upstream 293722 9392027 ~ 9398369 (+) True G51000
TU63777 lncRNA upstream 312512 9369132 ~ 9379579 (+) True AMCG00008707
TU63764 lncRNA upstream 337686 9352978 ~ 9354405 (+) True G50983
TU63706 lncRNA upstream 497453 9194404 ~ 9194638 (+) True G50932
TU63705 lncRNA upstream 498406 9193015 ~ 9193685 (+) True G50931
TU63900 lncRNA downstream 97066 9792138 ~ 9794219 (+) True G51094
TU63911 lncRNA downstream 220422 9915494 ~ 9937752 (+) False AMCG00008725
TU63938 lncRNA downstream 278224 9973296 ~ 9975207 (+) True G51129
TU63944 lncRNA downstream 284326 9979398 ~ 10071199 (+) True G51134
TU63971 lncRNA downstream 525161 10220233 ~ 10222915 (+) True G51157
AMCG00008720 mRNA upstream 52845 9621109 ~ 9639246 (+) True AMCG00008720
AMCG00008714 mRNA upstream 154634 9531791 ~ 9537457 (+) True AMCG00008714
AMCG00008716 mRNA upstream 162419 9527898 ~ 9529672 (+) True AMCG00008716
AMCG00008715 mRNA upstream 166404 9488495 ~ 9525687 (+) True AMCG00008715
AMCG00008711 mRNA upstream 283333 9400486 ~ 9408758 (+) True AMCG00008711
AMCG00008721 mRNA downstream 9510 9704582 ~ 9735738 (+) True AMCG00008721
AMCG00008726 mRNA downstream 166747 9861819 ~ 9910773 (+) True AMCG00008726
AMCG00008725 mRNA downstream 220422 9915494 ~ 9925896 (+) True AMCG00008725
AMCG00008727 mRNA downstream 232315 9927387 ~ 9931515 (+) True AMCG00008727
AMCG00008736 mRNA downstream 522266 10217338 ~ 10219366 (+) True AMCG00008736
TU63743 other upstream 375940 9310086 ~ 9316151 (+) False AMCG00008710
TU63744 other upstream 375940 9310086 ~ 9316151 (+) False AMCG00008710
TU63745 other upstream 375940 9310086 ~ 9316151 (+) True AMCG00008710
TU63657 other upstream 569279 9116737 ~ 9122812 (+) True AMCG00008696
TU63666 other upstream 604124 9081827 ~ 9087967 (+) True G50900
TU63913 other downstream 234406 9929478 ~ 9931081 (+) False AMCG00008727
TU63914 other downstream 234406 9929478 ~ 9931081 (+) False AMCG00008727
TU64057 other downstream 1010406 10705478 ~ 10707093 (+) False AMCG00008749
TU64201 other downstream 1289818 10984890 ~ 11040674 (+) False G51297
TU64384 other downstream 1765291 11460363 ~ 11465488 (+) True G51445

Expression Profile