RNA id: AMCG00008749


Basic Information

Item Value
RNA id AMCG00008749
length 1338
RNA type mRNA
GC content 0.61
exon number 9
gene id AMCG00008749
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 10692377 ~ 10771675 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atGAGCAGCAGTCGTTCCTCTATAAGTTTCAGATCCAgctctgggggtggggggggcagtggccGTATCAGCAGTGGCCGCGCTTTGGAtccggtggtggtggtggtggcggcaTCGGCCTGGGAGGTGGCATCGGCTTGGGAGGTGGCGGTGGTGGTGGCAGCGGCTATGGAATGGGCATCGGATTTGGCAGTGGCGGTGGCGGTGGCGGTGGCGGAGGCGGTGGCGGTGGCTATGGCATGTTCGGTGGTGGAAGCGGAGGCGGAGGGTGGTGGCTTAGGCTTTGGATCCggtggtagtggtggtggtggcggcaTCGGCCTGGGAGGTGGCGGCGGTGGTGGCAGCGGCTATGGAATGGGCATCGGATTTGGCAGTGGCAGTGGCGGTGGCGGTGGCGGTGGTGGAGGATATGGCATGTTTGGTGGTGGAAGCGGAGGCGGAGGATATGGCATGTTCGGTGGCGGTGGTGGAGGCGGAGGGTATGGCATGTTCGGTGGCGGAGATGGCGGCGTCCCTCTCATCACCTCCGTGACTGCCAATCTGAAACTGCTGAACCCCCCGGACTTAGTTATCGACCCCAACATCCAGGTGGTCCGCACCCAGGAGAAGGAGCAGATCAAGACTCTCAACAACCGCTTCGCCTCCTTCATCGACAAGGTGAGTGCCCCCCCTTCCAGCTCCCTGTTGGCGAGTAATTATAACTGCACATCTTCTGCCAACTTAAAAACACTCCTGCACCTTTACAGGTACGAAGATGAAATCAACAAGCGGGCCTCAGTGGAGAATGATTTTGTCCTGCTGAAGAAGGATGTCGATGGTGCCTACATGAACAAGATTGAGCTGGAGGCCAAGGCGGATGCCCTCCAGGATGAAATCAACTTCCTCAGGGCCATCTACGAGGAGGAGCTGCGCGAGCTGCAGGGCCAGATCAAGGACACCTCAGTGGTGGTGGAGATGGACAACAGCCGCAACCTGGACATGGACTCCATCGTGGCTGAAGTGCGCGCCCAGTATGAGGACATTGCCAACCGCAGCCGTGCAGAGGCAGAGAGCTGGTACAAGGCCAAGTACGAGGAGATGCAGAGCTCAGCTGGGAAATTTGGGGATGACCTCCGCAACACCAAGCAAGAGATCGCCGAGCTGAACCGCATGATCAGCCGGCTGCAGAACGAGATTGAGGCTGTCAAGGGCCAGCGCGCCAACCTGGAGGCCCAGATTGCAGAGGCCGAGGAGCGTGCCTCCGCCGCCACCGCCTCCCATTCCATAGCCTCCGCCGCCACCGCCTCCCATTCCAAatcctcctccaccaccaccaccaccggcGGAGAagtctag

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU64078 lncRNA upstream 9656 10681116 ~ 10682879 (+) False G51226
TU64084 lncRNA upstream 9656 10681116 ~ 10682879 (+) False G51226
TU64072 lncRNA upstream 18751 10609746 ~ 10673784 (+) True G51220
TU64052 lncRNA upstream 122599 10569710 ~ 10569936 (+) True G51212
TU64051 lncRNA upstream 124724 10566737 ~ 10567811 (+) True G51211
TU64061 lncRNA downstream 49337 10768653 ~ 10771675 (+) False AMCG00008749
TU64131 lncRNA downstream 84590 10803906 ~ 10804107 (+) True G51252
TU64133 lncRNA downstream 125065 10844381 ~ 10846286 (+) False AMCG00008752
TU64136 lncRNA downstream 125065 10844381 ~ 10846286 (+) False AMCG00008752
TU64158 lncRNA downstream 148619 10867935 ~ 10910645 (+) True G51265
AMCG00008746 mRNA upstream 67366 10618726 ~ 10625169 (+) True AMCG00008746
AMCG00008745 mRNA upstream 74370 10611383 ~ 10618165 (+) True AMCG00008745
AMCG00008742 mRNA upstream 380438 10311582 ~ 10312097 (+) True AMCG00008742
AMCG00008737 mRNA upstream 407377 10276950 ~ 10285158 (+) True AMCG00008737
AMCG00008738 mRNA upstream 417324 10258446 ~ 10275211 (+) True AMCG00008738
AMCG00008753 mRNA downstream 78455 10797771 ~ 10803672 (+) True AMCG00008753
AMCG00008752 mRNA downstream 109252 10828568 ~ 10846436 (+) True AMCG00008752
AMCG00008754 mRNA downstream 175726 10895042 ~ 10906610 (+) True AMCG00008754
AMCG00008755 mRNA downstream 191811 10911127 ~ 10929774 (+) True AMCG00008755
AMCG00008758 mRNA downstream 218923 10938239 ~ 10949947 (+) True AMCG00008758
TU63913 other upstream 761454 9929478 ~ 9931081 (+) False AMCG00008727
TU63914 other upstream 761454 9929478 ~ 9931081 (+) False AMCG00008727
TU63743 other upstream 1376384 9310086 ~ 9316151 (+) False AMCG00008710
TU64201 other downstream 265574 10984890 ~ 11040674 (+) False G51297
TU64384 other downstream 741047 11460363 ~ 11465488 (+) True G51445
TU64730 other downstream 1996178 12715494 ~ 12716786 (+) True G51734
TU64761 other downstream 2123399 12842715 ~ 12846233 (+) True G51756
TU64826 other downstream 2205922 12925238 ~ 12926794 (+) True G51812

Expression Profile