Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00008753 |
| length | 1261 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 7 |
| gene id | AMCG00008753 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 10797771 ~ 10803672 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU64061 | lncRNA | upstream | 26096 | 10768653 ~ 10771675 (+) | False | AMCG00008749 |
| TU64058 | lncRNA | upstream | 79609 | 10692377 ~ 10718162 (+) | False | AMCG00008749 |
| TU64079 | lncRNA | upstream | 85286 | 10675565 ~ 10712485 (+) | True | G51226 |
| TU64082 | lncRNA | upstream | 85286 | 10675565 ~ 10712485 (+) | False | G51226 |
| TU64080 | lncRNA | upstream | 85286 | 10681116 ~ 10712485 (+) | False | G51226 |
| TU64131 | lncRNA | downstream | 234 | 10803906 ~ 10804107 (+) | True | G51252 |
| TU64133 | lncRNA | downstream | 40709 | 10844381 ~ 10846286 (+) | False | AMCG00008752 |
| TU64136 | lncRNA | downstream | 40709 | 10844381 ~ 10846286 (+) | False | AMCG00008752 |
| TU64158 | lncRNA | downstream | 64263 | 10867935 ~ 10910645 (+) | True | G51265 |
| TU64180 | lncRNA | downstream | 147405 | 10951077 ~ 10953420 (+) | True | G51283 |
| AMCG00008749 | mRNA | upstream | 78455 | 10692535 ~ 10719316 (+) | True | AMCG00008749 |
| AMCG00008746 | mRNA | upstream | 172602 | 10618726 ~ 10625169 (+) | True | AMCG00008746 |
| AMCG00008745 | mRNA | upstream | 179606 | 10611383 ~ 10618165 (+) | True | AMCG00008745 |
| AMCG00008742 | mRNA | upstream | 485674 | 10311582 ~ 10312097 (+) | True | AMCG00008742 |
| AMCG00008737 | mRNA | upstream | 512613 | 10276950 ~ 10285158 (+) | True | AMCG00008737 |
| AMCG00008752 | mRNA | downstream | 24896 | 10828568 ~ 10846436 (+) | True | AMCG00008752 |
| AMCG00008754 | mRNA | downstream | 91370 | 10895042 ~ 10906610 (+) | True | AMCG00008754 |
| AMCG00008755 | mRNA | downstream | 107455 | 10911127 ~ 10929774 (+) | True | AMCG00008755 |
| AMCG00008758 | mRNA | downstream | 134567 | 10938239 ~ 10949947 (+) | True | AMCG00008758 |
| AMCG00008757 | mRNA | downstream | 146342 | 10950014 ~ 10950787 (+) | True | AMCG00008757 |
| TU64057 | other | upstream | 90678 | 10705478 ~ 10707093 (+) | False | AMCG00008749 |
| TU63913 | other | upstream | 866690 | 9929478 ~ 9931081 (+) | False | AMCG00008727 |
| TU63914 | other | upstream | 866690 | 9929478 ~ 9931081 (+) | False | AMCG00008727 |
| TU63743 | other | upstream | 1481620 | 9310086 ~ 9316151 (+) | False | AMCG00008710 |
| TU64201 | other | downstream | 181218 | 10984890 ~ 11040674 (+) | False | G51297 |
| TU64384 | other | downstream | 656691 | 11460363 ~ 11465488 (+) | True | G51445 |
| TU64730 | other | downstream | 1911822 | 12715494 ~ 12716786 (+) | True | G51734 |
| TU64761 | other | downstream | 2039043 | 12842715 ~ 12846233 (+) | True | G51756 |
| TU64826 | other | downstream | 2121566 | 12925238 ~ 12926794 (+) | True | G51812 |
