RNA id: AMCG00008758


Basic Information

Item Value
RNA id AMCG00008758
length 330
RNA type mRNA
GC content 0.64
exon number 2
gene id AMCG00008758
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 10938239 ~ 10949947 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCGCAGCCCCTGCCCGGTCTCTGACAACGCACCTGAAAATGTCTGCAAGGACGCTGTAACCCGGCGTGACAGTCCGAGTGACGGCGCTGAATATCGGAGCAGAGGGGCCTGTGGCCCCGAGAGCACCTGTGGGCAGCGCGACGTGGGTCACCGGCGGCCGCTAGATACCCCCCGCCCCGACAGCATCCCGCACATGACCGGATCAGACCGGAGGGGACCCGGCTTGTTCGAGAGAATGGGAGGCGGGCGGAGCGGAGTCGCCGTGTGCATAATAATACACCGAGCCGCGGGTCTGCTGATTGGATTCCGGATGGGAGCCGTTTCATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU64158 lncRNA upstream 27594 10867935 ~ 10910645 (+) True G51265
TU64133 lncRNA upstream 91953 10844381 ~ 10846286 (+) False AMCG00008752
TU64136 lncRNA upstream 91953 10844381 ~ 10846286 (+) False AMCG00008752
TU64131 lncRNA upstream 134132 10803906 ~ 10804107 (+) True G51252
TU64061 lncRNA upstream 166564 10768653 ~ 10771675 (+) False AMCG00008749
TU64180 lncRNA downstream 1130 10951077 ~ 10953420 (+) True G51283
TU64202 lncRNA downstream 70269 11020216 ~ 11024020 (+) False G51298
TU64205 lncRNA downstream 70269 11020216 ~ 11057436 (+) True G51298
TU64199 lncRNA downstream 88394 11038341 ~ 11040674 (+) True G51297
TU64385 lncRNA downstream 515865 11465812 ~ 11466083 (+) True G51446
AMCG00008755 mRNA upstream 8465 10911127 ~ 10929774 (+) True AMCG00008755
AMCG00008754 mRNA upstream 31629 10895042 ~ 10906610 (+) True AMCG00008754
AMCG00008752 mRNA upstream 91803 10828568 ~ 10846436 (+) True AMCG00008752
AMCG00008753 mRNA upstream 134567 10797771 ~ 10803672 (+) True AMCG00008753
AMCG00008749 mRNA upstream 218923 10692535 ~ 10719316 (+) True AMCG00008749
AMCG00008757 mRNA downstream 67 10950014 ~ 10950787 (+) True AMCG00008757
AMCG00008759 mRNA downstream 47623 10997570 ~ 11017498 (+) True AMCG00008759
AMCG00008760 mRNA downstream 102795 11052742 ~ 11061279 (+) True AMCG00008760
AMCG00008768 mRNA downstream 165077 11115024 ~ 11122159 (+) True AMCG00008768
AMCG00008769 mRNA downstream 194075 11144022 ~ 11152563 (+) True AMCG00008769
TU64057 other upstream 231146 10705478 ~ 10707093 (+) False AMCG00008749
TU63913 other upstream 1007158 9929478 ~ 9931081 (+) False AMCG00008727
TU63914 other upstream 1007158 9929478 ~ 9931081 (+) False AMCG00008727
TU63744 other upstream 1622088 9310086 ~ 9316151 (+) False AMCG00008710
TU64201 other downstream 34943 10984890 ~ 11040674 (+) False G51297
TU64384 other downstream 510416 11460363 ~ 11465488 (+) True G51445
TU64730 other downstream 1765547 12715494 ~ 12716786 (+) True G51734
TU64761 other downstream 1892768 12842715 ~ 12846233 (+) True G51756
TU64826 other downstream 1975291 12925238 ~ 12926794 (+) True G51812

Expression Profile