RNA id: AMCG00008761


Basic Information

Item Value
RNA id AMCG00008761
length 1358
RNA type mRNA
GC content 0.53
exon number 4
gene id AMCG00008761
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 11038302 ~ 11044119 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGAAGTGTTTATAAtgtgctgattttgtttttctttccacatgGATGTGACAGTTGATCTGACCGCTGTGCAGGGACGCTGTTCCAGTTCCGCCCGGACCTCCGACCCCAGGCTGCCGCGGCGCTCAGTACATAAGGGGCGGGGATTGAAGCAGCACTGTATCCGGAAGAACCGCGGCTTGTCATCGAGCTGCAACCCTGATCTCGCACCTCTTTCTGGAGACGAGCTAGTGAGGAAAGAAGAGATATGTGGCCAAATCAAGGGCAGCAGCCAGGGGGATATCCCATGGGTCCGCCGCCCCCCAACCCTAACTATCCTCCAGGCCACGACCCAGCCTACCCACCAGGAGCAAACCCAGCCTTCCCTCCTGCTGTCAACCCCCAATTCCCAGGCCCCTACCCCGTGCCTCCAGGTGGCATGCCAGGCCAGCAGCCTTACCACCCTGGCCCTGGGACCTATCCAGGAGTCCCCGCCTGTCCCCCTGGGTATCCTGGGGTCAACCCCGCTTACCCAGCCCCACCTGGTGGGGTCCTCCCAGGCCCCTATCCCACTGGGTACCCAGTAGACCATCACGGCAAAGGCCACAAGCACGGAAAACACTATCCCATGGCACCCGGCATGGCAGGGGGATTAGCTGGGGGGCTGGCGGGGGTTGGCATGGTGATGGGAGGGCACAAGGCACacaagaagatgaagaagaagatgaagaaggaCCACAAGTACCATAAGCATGGGAAGCAttcctccagcagcagcagcagcagcagcgactCGGACTGACCATCACTCTTGACGCTGACGCGGAGTCGCAGACCAGTCCAGACAATCGCCGATCAGGACTGCAGCTCCCTGTTCAAAAGATATTGCATATGGGCTTTTGCAGAACGGGTTCACACACTGTCCTCCGGGGGCTGCCCACTACAACACATTCCCCTGACGCCTCACGTTTAGCAAGTGAGAAGGCAGATTTTCCGTTGCGTAATATTTCGGGCTTCTCTGAGGACACCCCTGGATGCCACTGTAAGTCCCACTGTGCTACTGACTATATAACTGCTTTCTTTTATCTAAtctatatatgaatgtatatgtataatctTATAAAGAGGGCGAGTGTGAAATTATCTGTAGATAATGgaagaaagctttttttttttttttttttcttcctcatatTATAAGATACATTCACATCCAGTTTTAACCAAACACAGCATTCCAATTTGAATCAGTTCCCCGgacatcaataaattaataacttcAAAGGCTTTTTTGTGGCGTCCCTTTTTCTGCCAGTCTAGCACAAAtttgcacaaataaaatgtggggggtggtggagggggaAGGGAAAATTCTCAAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU64148 lncRNA downstream 198630 10839106 ~ 10839672 (-) True G51261
TU64129 lncRNA downstream 234593 10801108 ~ 10803709 (-) True G51251
TU64130 lncRNA downstream 234593 10801108 ~ 10803709 (-) False G51251
TU64107 lncRNA downstream 325817 10675756 ~ 10712485 (-) False G51241
TU64265 lncRNA upstream 13558 11057677 ~ 11059926 (-) True G51344
TU64261 lncRNA upstream 13571 11057690 ~ 11140273 (-) False G51344
TU64262 lncRNA upstream 13571 11057690 ~ 11059926 (-) False G51344
TU64266 lncRNA upstream 13571 11057690 ~ 11059926 (-) False G51344
TU64280 lncRNA upstream 119227 11163346 ~ 11164374 (-) True G51354
AMCG00008763 mRNA downstream 2575 11021548 ~ 11035727 (-) True AMCG00008763
AMCG00008765 mRNA downstream 26731 11004156 ~ 11011571 (-) True AMCG00008765
AMCG00008756 mRNA downstream 65923 10958584 ~ 10972379 (-) True AMCG00008756
AMCG00008751 mRNA downstream 266648 10764016 ~ 10771654 (-) True AMCG00008751
AMCG00008750 mRNA downstream 313126 10719492 ~ 10725176 (-) True AMCG00008750
AMCG00008764 mRNA upstream 844 11044963 ~ 11051426 (-) True AMCG00008764
AMCG00008762 mRNA upstream 18168 11062287 ~ 11073591 (-) True AMCG00008762
AMCG00008767 mRNA upstream 90067 11134186 ~ 11143361 (-) True AMCG00008767
AMCG00008766 mRNA upstream 106800 11150919 ~ 11171928 (-) True AMCG00008766
AMCG00008772 mRNA upstream 166067 11210186 ~ 11221258 (-) True AMCG00008772
TU64128 other downstream 239148 10797632 ~ 10799154 (-) True G51250
TU64119 other downstream 320101 10677263 ~ 10718201 (-) False AMCG00008748
TU64340 other upstream 191523 11235642 ~ 11295750 (-) False AMCG00008777
TU64350 other upstream 276691 11320810 ~ 11326359 (-) False AMCG00008777
TU64811 other upstream 1846692 12890811 ~ 12891597 (-) True G51797
TU64813 other upstream 1851216 12895335 ~ 12897134 (-) True G51799
TU64897 other upstream 1956707 13000826 ~ 13001888 (-) True G51867

Expression Profile