RNA id: AMCG00008764


Basic Information

Item Value
RNA id AMCG00008764
length 1919
RNA type mRNA
GC content 0.56
exon number 11
gene id AMCG00008764
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 11044963 ~ 11051426 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtgtgtgagagagagagagagagagagagagagagggagtatgtgtgttgtctgtctgtgtttgtgtgtgtgtgagagagagtgtatgcAGTGCTGGTCCTTATCGGAGCCAGCGCAGGTGCCCGGGCTGTGGGAGGGAACTGTGGGAATTGCGGCTTCCCCCCAGTTTGTCGGACTCAGTTGGAGCACAAGACAGACTGTCCTGCAATGTCGGCGCTCTGGTGGGCACCCATCCTAACTCTGTTCGATGTTTCGCTGGGGAGGAGATGCACTTATTACAAAGGCCCCTACACCTCCATTGAGAAGATAGGGCAGGGCAACATCAGTGGCAATGCCCAgtcctgcacacacagcagctgctgCACGGGCATCTTCCGGCTGGTCAACGGGCAGCCCATACCTGACTGGCAAGGTTGCAGCAAGACAGATGATCAATGCAGTGACATATGCACCTCCACCCAGCTGATCGACCAAAATTACACCACCTGTGTTTGCAACTCAGATTTCTGCAATGCCAAGCTGATCTGGGTCCCAGCAGACAGGGGTACTCATGGCTCTGATATGATACCGCTGGCTCTGTCTCTTGGGGGGTTTCTGTTGATCATGGTGTTTGGCTTTCTGTCCCTGTGGTGTGCAAAGGTGATGCAGGGTGGGACTGTGACATCACTGTGCTTGTGCGAGAGATCGGAGAGACCTGCCCTGGACTTTAGCAATATAGAGCTGCAGCAGGTGCTGGGCAAGGGGAGCAATGCCAAGGTATGGCAAGGGACTCTGCAGGGGACCAGTGTGGTGTTCAAGGTGTACCCCCCGACCTGCCACCGCCTCTACAGCACAGAGAGGGAAGTGTACGAACTGCCCCTGATGGAGCACAGCTCCATCATTAGGTTCCTGGGAGCGGGGACGTCGCCAGAGACCAGGGACTGCATGCTGGTCTTGGAACTGGCACCGCATGGCTCCCTGCACTCCTATCTCTCCCAGAACATCACCGACTGGCCAGCCACTGTGAAACTAGGCCTCTCCCTGGCTGAAGGCCTGGCCTTTCTGCACGCTGTTGTCAGCAGGAACGATTTACACAAGCCGGCCGTTGCCCACCGAGACCTCAGCAGCAGCAATATCCTGGTGAAGGCCGACGGCACCTGTGCCTTGTGTGACTTCGGCTTCTCCACTATCCTGTGCTCCAGCCCCAGGCACCAGGGATACCAGCTCAATTCCGACAATCGTCAGCAGGCCGACGTTTATGCACTGGGGCTCCTGCTGTGGGAGATCAGCATGAGGTGCCGCGACCTCTCTTCAGGCGCTGTGGTGCCCGAGCACCGCCTGCCCTACGAGGCAGAGCTGAGCGCCAGCCCCAGCCTGGAAGAGCTGCTCATGCTGGTGTCCAAGAGGGGAGCACGCCCCCAGGTGCCTGCGCGGTGGAGACGCACCATTCAGGGCCGTACCAGCCTGAGCGAGATTCTCGAGAACTGCTGGGACCACGACCCTGAAGCCAGGCTGACGGCCCAGTGTGCTGCAGACAGATTGGCCGCCCTCCTACCTCCCTGACCGGCCCTGGACGCAGCTGTTTCCACATGGTCCCCCAGTGCTTGCTGCCACGCTCTTCGTTCAGCTGGTCCTGATGTGTGACCAGGGCCTAATCTGTGAATCAAATGGGGGGCAGCGCTCAGTAGGAAAGGGAGCGCTAGTGTGACGATATGCTCTTTTTTAGGCTGATACCTGGGTACACAGTTCAGggactgttttgtttcctgtacaCACCTCACCACAACCTTTTCTAGTATCTCCTTTTACAATACTTTCACCAACATAGGCAATGCATGTttgatattcattattttgttgttgtttttttaaataaaactacatttaaaaaaagtaacaagATGTACTTTCTTAATGACTTGGGGAAATGGTACCAGGGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU64148 lncRNA downstream 205291 10839106 ~ 10839672 (-) True G51261
TU64129 lncRNA downstream 241254 10801108 ~ 10803709 (-) True G51251
TU64130 lncRNA downstream 241254 10801108 ~ 10803709 (-) False G51251
TU64107 lncRNA downstream 332478 10675756 ~ 10712485 (-) False G51241
TU64265 lncRNA upstream 6251 11057677 ~ 11059926 (-) True G51344
TU64261 lncRNA upstream 6264 11057690 ~ 11140273 (-) False G51344
TU64262 lncRNA upstream 6264 11057690 ~ 11059926 (-) False G51344
TU64266 lncRNA upstream 6264 11057690 ~ 11059926 (-) False G51344
TU64280 lncRNA upstream 111920 11163346 ~ 11164374 (-) True G51354
AMCG00008761 mRNA downstream 844 11038302 ~ 11044119 (-) True AMCG00008761
AMCG00008763 mRNA downstream 9236 11021548 ~ 11035727 (-) True AMCG00008763
AMCG00008765 mRNA downstream 33392 11004156 ~ 11011571 (-) True AMCG00008765
AMCG00008756 mRNA downstream 72584 10958584 ~ 10972379 (-) True AMCG00008756
AMCG00008751 mRNA downstream 273309 10764016 ~ 10771654 (-) True AMCG00008751
AMCG00008762 mRNA upstream 10861 11062287 ~ 11073591 (-) True AMCG00008762
AMCG00008767 mRNA upstream 82760 11134186 ~ 11143361 (-) True AMCG00008767
AMCG00008766 mRNA upstream 99493 11150919 ~ 11171928 (-) True AMCG00008766
AMCG00008772 mRNA upstream 158760 11210186 ~ 11221258 (-) True AMCG00008772
AMCG00008773 mRNA upstream 182066 11233492 ~ 11250237 (-) True AMCG00008773
TU64128 other downstream 245809 10797632 ~ 10799154 (-) True G51250
TU64119 other downstream 326762 10677263 ~ 10718201 (-) False AMCG00008748
TU64340 other upstream 184216 11235642 ~ 11295750 (-) False AMCG00008777
TU64350 other upstream 269384 11320810 ~ 11326359 (-) False AMCG00008777
TU64811 other upstream 1839385 12890811 ~ 12891597 (-) True G51797
TU64813 other upstream 1843909 12895335 ~ 12897134 (-) True G51799
TU64897 other upstream 1949400 13000826 ~ 13001888 (-) True G51867

Expression Profile