RNA id: AMCG00008765


Basic Information

Item Value
RNA id AMCG00008765
length 852
RNA type mRNA
GC content 0.59
exon number 7
gene id AMCG00008765
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 11004156 ~ 11011571 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atggaattggaattgaacttaagctctgaaatgtgtgtgttgaatAGTCGTCATCCCCCCAGCCCCTACTGGCCCCTGGCCTCACCAACACTGCCTCAGCAGGATCTTGAAGCCGTCGGGGCAGCTCTCAGGCACAGGCAGCTGCAGGCTGTTGTTGCCCACGCCCCAGATGATGGCAGAGGAGTCCACGTCCTTAAGTGGGCGGTGCCAGTCCTTGTCTACCCCCTGCTGGCAGACCCTTGGCAACCTCCTAATTACCCTGTGCGGAGGTGTGGCGCGGTGCCAGCAGGGAGGATGGCGGCTGAGCCGGGGCTGTGCGGCTGGCGGAGCGGGCACGCCTTTGCTGTGACAGGCTGCATTAGGAGAACAGAGTCCTGGCTGGGCTGCTCCCCCCTCCGTGGTGCGGCACTTGGTGAGGAGGTTgtgagATGGAAACGCAATTCTGCTGTCCCTGCAAATGAGAGAGCAAAAGCGAGTGGCACAGAGCCAGGCACTGGGCTTCTTCAGATGTCCACTTTCTCTGACACCGGCTCGTTGCGGATCACCTCAGGTGCCATCCAGGCCACTGTCCCCGCAAAGGACATCTTGGTGCTCTTGTCACTTAGCTCCTTGGAGGTGCCAAAGTGCTTGATGTCCGTCTCCTTGATGTCGCGCACCTTCTTCACTGCCACTTCCTCCCCGTGGAACTTCCCCAGGAACACGGCCCCCTGGGCACCACTGCCCACCCACTGCAGGTCAGAGATCTCCTCAAAGGGCACCTCCCACAACTCTGAGGGACAAAAACAGATGGTGGGGGGGAAGATTAGTGGGACAGACGTTGAGTTAACATCTTGGGATTCGCTACAGTTGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU64148 lncRNA downstream 164484 10839106 ~ 10839672 (-) True G51261
TU64129 lncRNA downstream 200447 10801108 ~ 10803709 (-) True G51251
TU64130 lncRNA downstream 200447 10801108 ~ 10803709 (-) False G51251
TU64107 lncRNA downstream 291671 10675756 ~ 10712485 (-) False G51241
TU64265 lncRNA upstream 46106 11057677 ~ 11059926 (-) True G51344
TU64261 lncRNA upstream 46119 11057690 ~ 11140273 (-) False G51344
TU64262 lncRNA upstream 46119 11057690 ~ 11059926 (-) False G51344
TU64266 lncRNA upstream 46119 11057690 ~ 11059926 (-) False G51344
TU64280 lncRNA upstream 151775 11163346 ~ 11164374 (-) True G51354
AMCG00008756 mRNA downstream 31777 10958584 ~ 10972379 (-) True AMCG00008756
AMCG00008751 mRNA downstream 232502 10764016 ~ 10771654 (-) True AMCG00008751
AMCG00008750 mRNA downstream 278980 10719492 ~ 10725176 (-) True AMCG00008750
AMCG00008748 mRNA downstream 325183 10670949 ~ 10678973 (-) False AMCG00008748
AMCG00008747 mRNA downstream 341965 10655011 ~ 10662191 (-) True AMCG00008747
AMCG00008763 mRNA upstream 9977 11021548 ~ 11035727 (-) True AMCG00008763
AMCG00008761 mRNA upstream 26731 11038302 ~ 11044119 (-) True AMCG00008761
AMCG00008764 mRNA upstream 33392 11044963 ~ 11051426 (-) True AMCG00008764
AMCG00008762 mRNA upstream 50716 11062287 ~ 11073591 (-) True AMCG00008762
AMCG00008767 mRNA upstream 122615 11134186 ~ 11143361 (-) True AMCG00008767
TU64128 other downstream 205002 10797632 ~ 10799154 (-) True G51250
TU64119 other downstream 285955 10677263 ~ 10718201 (-) False AMCG00008748
TU64340 other upstream 224071 11235642 ~ 11295750 (-) False AMCG00008777
TU64350 other upstream 309239 11320810 ~ 11326359 (-) False AMCG00008777
TU64811 other upstream 1879240 12890811 ~ 12891597 (-) True G51797
TU64813 other upstream 1883764 12895335 ~ 12897134 (-) True G51799
TU64897 other upstream 1989255 13000826 ~ 13001888 (-) True G51867

Expression Profile