RNA id: AMCG00008767


Basic Information

Item Value
RNA id AMCG00008767
length 744
RNA type mRNA
GC content 0.60
exon number 8
gene id AMCG00008767
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 11134186 ~ 11143361 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGGGGGTTTTGCACAAGTGGACCAACTACTTATCggGGTGGCAGCCTCGATATTTCGTCCTGGATGGCACCATCCTCTCCTACTACGACTCCCAGGAGGATGTGGGCAAAGGTAGTAAAGGCAGTATAAAGATGGCGGTGTGTGAGATTAAAGTGCACTCAACTGACAGCACGCGTGTGGACCTGGTCATCCCTGGGGAGCAGTACTTCTACCTGAAGGCCCTGACCGCCGGGGAGAGGCAGCGGTGGCTGGTGGCTCTGGGCACTGCCAAGGCTTGTCTGGCAGACGGCCGCTCTAAGAAGGAAAAAGAGCTGAGTGATGTCAGTCAGACCCTGAAGGGAAAGATGTCCGAGCTACGCTTGTACTGCGACCTACTGCTGGAGCAGGTCCACAAGATCCAGGAGTCCGCCCAGCCCAGCGAGGGAGAGGCCCGGCCTGACACCCAGGCCATGACGGAGGCATCCTCCCTGCTGACAGAGACCTGTAACCAGTTTGTAGGAGCCCTGGAAGACTGCATGCGCATCTCCAGCAGCCGCATGGCCCCCGAGCTGCTGTGCCATGTGGACCCCCCGGACTCCCCTGCCATGATGGTGAAGCGCTCTGTGAGTCACACTGGTGTCACTGCAGAGAGGCTGGAGATGGCGACGGGCTCACGGTTCGAGGCGAAAGACGGGGAGACGGTGCTGCGCAACCTGGAGCAGATGGTGGCCTTCCGGGCCCAGAGACGAGGCttgTTGTAA

Function

GO:      GO:0008536

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU64265 lncRNA downstream 74260 11057677 ~ 11059926 (-) True G51344
TU64262 lncRNA downstream 74260 11057690 ~ 11059926 (-) False G51344
TU64266 lncRNA downstream 74260 11057690 ~ 11059926 (-) False G51344
TU64148 lncRNA downstream 294514 10839106 ~ 10839672 (-) True G51261
TU64129 lncRNA downstream 330477 10801108 ~ 10803709 (-) True G51251
TU64280 lncRNA upstream 19985 11163346 ~ 11164374 (-) True G51354
TU64337 lncRNA upstream 83126 11226487 ~ 11258218 (-) True G51403
TU64527 lncRNA upstream 859564 12002925 ~ 12010394 (-) True G51574
TU64548 lncRNA upstream 937851 12081212 ~ 12093785 (-) True G51588
TU64607 lncRNA upstream 1199779 12343140 ~ 12343342 (-) True G51634
AMCG00008762 mRNA downstream 60595 11062287 ~ 11073591 (-) True AMCG00008762
AMCG00008764 mRNA downstream 82760 11044963 ~ 11051426 (-) True AMCG00008764
AMCG00008761 mRNA downstream 90067 11038302 ~ 11044119 (-) True AMCG00008761
AMCG00008763 mRNA downstream 98459 11021548 ~ 11035727 (-) True AMCG00008763
AMCG00008765 mRNA downstream 122615 11004156 ~ 11011571 (-) True AMCG00008765
AMCG00008766 mRNA upstream 7558 11150919 ~ 11171928 (-) True AMCG00008766
AMCG00008772 mRNA upstream 66825 11210186 ~ 11221258 (-) True AMCG00008772
AMCG00008773 mRNA upstream 90131 11233492 ~ 11250237 (-) True AMCG00008773
AMCG00008777 mRNA upstream 151052 11294413 ~ 11324713 (-) True AMCG00008777
AMCG00008776 mRNA upstream 192415 11335776 ~ 11348560 (-) True AMCG00008776
TU64128 other downstream 335032 10797632 ~ 10799154 (-) True G51250
TU64119 other downstream 415985 10677263 ~ 10718201 (-) False AMCG00008748
TU64340 other upstream 92281 11235642 ~ 11295750 (-) False AMCG00008777
TU64350 other upstream 177449 11320810 ~ 11326359 (-) False AMCG00008777
TU64811 other upstream 1747450 12890811 ~ 12891597 (-) True G51797
TU64813 other upstream 1751974 12895335 ~ 12897134 (-) True G51799
TU64897 other upstream 1857465 13000826 ~ 13001888 (-) True G51867

Expression Profile