RNA id: AMCG00008795



Basic Information


Item Value
RNA id AMCG00008795
length 306
RNA type mRNA
GC content 0.57
exon number 2
gene id AMCG00008795
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12132486 ~ 12143358 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGACTGTGGGCTCCAAGTCCACGAACACAGCCCGGGGGACGTGCTTGCCAGAGCCCGTCTCGCTGAAGAAGGTGGTGAAGGACGAGTCCACAATGGCGGGGCTGCTCGGGTCGGAGATGGTGCCGTCCGGCTTGATCCCGTGCTCCAGGCAGAACAGCTCCCAGCACGAGTTTCCAATCTGCACGCCCGCTTGCCCAACATGCACAGAAATACACTCCCTCTGCATTGAGCCCAACGAGACGAGATTAGCACCATCATTGCACGACCTTCTGGAGAAAATAAGTCCTGTAAAGTTCTTCACCTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU64544 lncRNA upstream 52282 12078697 ~ 12080204 (+) True G51586
TU64539 lncRNA upstream 54973 12075488 ~ 12077513 (+) True G51584
TU64537 lncRNA upstream 70197 12062074 ~ 12062289 (+) True G51582
TU64429 lncRNA upstream 416004 11712712 ~ 11716482 (+) False G51483
TU64579 lncRNA downstream 47375 12190733 ~ 12249909 (+) True G51614
TU64639 lncRNA downstream 282575 12425933 ~ 12426222 (+) True G51665
TU64647 lncRNA downstream 295493 12438851 ~ 12439523 (+) True G51673
TU64660 lncRNA downstream 360558 12503916 ~ 12504176 (+) True G51685
TU64650 lncRNA downstream 404702 12548060 ~ 12549618 (+) True AMCG00008810
AMCG00008798 mRNA upstream 5884 12113384 ~ 12126602 (+) True AMCG00008798
AMCG00008791 mRNA upstream 129680 11982778 ~ 12002806 (+) True AMCG00008791
AMCG00008787 mRNA upstream 298142 11833286 ~ 11834344 (+) True AMCG00008787
AMCG00008784 mRNA upstream 428078 11694841 ~ 11704408 (+) False AMCG00008784
AMCG00008782 mRNA upstream 513631 11602415 ~ 11618855 (+) True AMCG00008782
AMCG00008800 mRNA downstream 86169 12229527 ~ 12235458 (+) True AMCG00008800
AMCG00008799 mRNA downstream 93273 12236631 ~ 12237359 (+) True AMCG00008799
AMCG00008804 mRNA downstream 194528 12337886 ~ 12338736 (+) True AMCG00008804
AMCG00008803 mRNA downstream 215369 12358727 ~ 12359365 (+) True AMCG00008803
AMCG00008808 mRNA downstream 242222 12385580 ~ 12386302 (+) True AMCG00008808
TU64384 other upstream 666998 11460363 ~ 11465488 (+) True G51445
TU64201 other upstream 1091812 10984890 ~ 11040674 (+) False G51297
TU64057 other upstream 1425393 10705478 ~ 10707093 (+) False AMCG00008749
TU63913 other upstream 2201405 9929478 ~ 9931081 (+) False AMCG00008727
TU64730 other downstream 572136 12715494 ~ 12716786 (+) True G51734
TU64761 other downstream 699357 12842715 ~ 12846233 (+) True G51756
TU64826 other downstream 781880 12925238 ~ 12926794 (+) True G51812
TU64845 other downstream 837446 12980804 ~ 12992492 (+) True AMCG00008837
TU64968 other downstream 1078962 13222320 ~ 13224946 (+) True G51928

Expression Profile