Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00008841 |
| length | 1288 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 7 |
| gene id | AMCG00008841 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 13105526 ~ 13117044 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0030182 | neuron differentiation | biological_process |
| id | description |
|---|---|
| K15731 | CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU64844 | lncRNA | upstream | 124751 | 12978864 ~ 12980775 (+) | True | G51828 |
| TU64828 | lncRNA | upstream | 177681 | 12927618 ~ 12927845 (+) | True | G51814 |
| TU64810 | lncRNA | upstream | 208419 | 12896349 ~ 12897107 (+) | True | G51796 |
| TU64732 | lncRNA | upstream | 359760 | 12739197 ~ 12745766 (+) | True | G51736 |
| TU64731 | lncRNA | upstream | 382546 | 12721082 ~ 12722980 (+) | True | G51735 |
| TU64940 | lncRNA | downstream | 23519 | 13140563 ~ 13187139 (+) | True | G51904 |
| TU64982 | lncRNA | downstream | 136770 | 13253814 ~ 13257640 (+) | True | G51939 |
| TU65028 | lncRNA | downstream | 192572 | 13309616 ~ 13310773 (+) | True | G51968 |
| TU65029 | lncRNA | downstream | 194285 | 13311329 ~ 13312458 (+) | True | G51969 |
| TU65030 | lncRNA | downstream | 196546 | 13313590 ~ 13315052 (+) | True | G51970 |
| AMCG00008840 | mRNA | upstream | 7611 | 13074080 ~ 13097915 (+) | True | AMCG00008840 |
| AMCG00008835 | mRNA | upstream | 40445 | 13063495 ~ 13065081 (+) | True | AMCG00008835 |
| AMCG00008838 | mRNA | upstream | 91393 | 13005602 ~ 13014133 (+) | True | AMCG00008838 |
| AMCG00008836 | mRNA | upstream | 103442 | 12997098 ~ 13002084 (+) | True | AMCG00008836 |
| AMCG00008837 | mRNA | upstream | 112801 | 12980944 ~ 12992725 (+) | False | AMCG00008837 |
| AMCG00008842 | mRNA | downstream | 6187 | 13123231 ~ 13132675 (+) | True | AMCG00008842 |
| AMCG00008847 | mRNA | downstream | 164230 | 13281274 ~ 13288925 (+) | True | AMCG00008847 |
| AMCG00008858 | mRNA | downstream | 182262 | 13299306 ~ 13302628 (+) | True | AMCG00008858 |
| AMCG00008856 | mRNA | downstream | 189451 | 13306495 ~ 13309244 (+) | True | AMCG00008856 |
| AMCG00008857 | mRNA | downstream | 216721 | 13333765 ~ 13347362 (+) | True | AMCG00008857 |
| TU64845 | other | upstream | 113034 | 12980804 ~ 12992492 (+) | True | AMCG00008837 |
| TU64826 | other | upstream | 178732 | 12925238 ~ 12926794 (+) | True | G51812 |
| TU64761 | other | upstream | 259293 | 12842715 ~ 12846233 (+) | True | G51756 |
| TU64730 | other | upstream | 388740 | 12715494 ~ 12716786 (+) | True | G51734 |
| TU64384 | other | upstream | 1640038 | 11460363 ~ 11465488 (+) | True | G51445 |
| TU64968 | other | downstream | 105276 | 13222320 ~ 13224946 (+) | True | G51928 |
| TU64983 | other | downstream | 137134 | 13254178 ~ 13257640 (+) | False | G51939 |
| TU65027 | other | downstream | 189688 | 13306732 ~ 13309430 (+) | False | AMCG00008856 |
| TU65505 | other | downstream | 1364877 | 14481921 ~ 14483255 (+) | True | G52349 |
| TU65523 | other | downstream | 1410774 | 14527818 ~ 14540958 (+) | False | AMCG00008910 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00046289 | False | 831 | mRNA | 0.51 | 8 | NC_007135.7 | 20450804 ~ 20531474 (-) |
| grasscarp (Ctenopharyngodon idella) | CI01000009_12130688_12146560.mRNA | True | 4300 | mRNA | 0.43 | 9 | CI01000009 | 12130688 ~ 12146942 (+) |
