Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00008847 |
| length | 1182 |
| RNA type | mRNA |
| GC content | 0.64 |
| exon number | 5 |
| gene id | AMCG00008847 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 13281274 ~ 13288925 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0035284 | brain segmentation | biological_process |
| GO:0021587 | cerebellum morphogenesis | biological_process |
| GO:0021592 | fourth ventricle development | biological_process |
| GO:0030917 | midbrain-hindbrain boundary development | biological_process |
| GO:0016055 | Wnt signaling pathway | biological_process |
| GO:0005102 | signaling receptor binding | molecular_function |
| id | description |
|---|---|
| K03209 | WNT1; wingless-type MMTV integration site family, member 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU64982 | lncRNA | upstream | 23634 | 13253814 ~ 13257640 (+) | True | G51939 |
| TU64940 | lncRNA | upstream | 94135 | 13140563 ~ 13187139 (+) | True | G51904 |
| TU64844 | lncRNA | upstream | 300499 | 12978864 ~ 12980775 (+) | True | G51828 |
| TU64828 | lncRNA | upstream | 353429 | 12927618 ~ 12927845 (+) | True | G51814 |
| TU64810 | lncRNA | upstream | 384167 | 12896349 ~ 12897107 (+) | True | G51796 |
| TU65028 | lncRNA | downstream | 20691 | 13309616 ~ 13310773 (+) | True | G51968 |
| TU65029 | lncRNA | downstream | 22404 | 13311329 ~ 13312458 (+) | True | G51969 |
| TU65030 | lncRNA | downstream | 24665 | 13313590 ~ 13315052 (+) | True | G51970 |
| TU65130 | lncRNA | downstream | 187825 | 13476750 ~ 13476978 (+) | True | G52044 |
| TU65199 | lncRNA | downstream | 397914 | 13686839 ~ 13687780 (+) | True | G52100 |
| AMCG00008842 | mRNA | upstream | 148599 | 13123231 ~ 13132675 (+) | True | AMCG00008842 |
| AMCG00008841 | mRNA | upstream | 164230 | 13105526 ~ 13117044 (+) | True | AMCG00008841 |
| AMCG00008840 | mRNA | upstream | 183359 | 13074080 ~ 13097915 (+) | True | AMCG00008840 |
| AMCG00008835 | mRNA | upstream | 216193 | 13063495 ~ 13065081 (+) | True | AMCG00008835 |
| AMCG00008838 | mRNA | upstream | 267141 | 13005602 ~ 13014133 (+) | True | AMCG00008838 |
| AMCG00008858 | mRNA | downstream | 10381 | 13299306 ~ 13302628 (+) | True | AMCG00008858 |
| AMCG00008856 | mRNA | downstream | 17570 | 13306495 ~ 13309244 (+) | True | AMCG00008856 |
| AMCG00008857 | mRNA | downstream | 44840 | 13333765 ~ 13347362 (+) | True | AMCG00008857 |
| AMCG00008855 | mRNA | downstream | 66480 | 13355405 ~ 13366105 (+) | True | AMCG00008855 |
| AMCG00008854 | mRNA | downstream | 79673 | 13368598 ~ 13377702 (+) | True | AMCG00008854 |
| TU64983 | other | upstream | 23634 | 13254178 ~ 13257640 (+) | False | G51939 |
| TU64968 | other | upstream | 56328 | 13222320 ~ 13224946 (+) | True | G51928 |
| TU64845 | other | upstream | 288782 | 12980804 ~ 12992492 (+) | True | AMCG00008837 |
| TU64826 | other | upstream | 354480 | 12925238 ~ 12926794 (+) | True | G51812 |
| TU64761 | other | upstream | 435041 | 12842715 ~ 12846233 (+) | True | G51756 |
| TU65027 | other | downstream | 17807 | 13306732 ~ 13309430 (+) | False | AMCG00008856 |
| TU65505 | other | downstream | 1192996 | 14481921 ~ 14483255 (+) | True | G52349 |
| TU65523 | other | downstream | 1238893 | 14527818 ~ 14540958 (+) | False | AMCG00008910 |
| TU65601 | other | downstream | 1503244 | 14792169 ~ 14794972 (+) | False | AMCG00008920 |
| TU65600 | other | downstream | 1503419 | 14792344 ~ 14794972 (+) | False | AMCG00008920 |
