RNA id: AMCG00008893



Basic Information


Item Value
RNA id AMCG00008893
length 313
RNA type mRNA
GC content 0.64
exon number 2
gene id AMCG00008893
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14089653 ~ 14092404 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTGGTTACTGACTAGCCTGTCTCTGCAGATGGACCCAGTCCAGAAGGCGGTGATCAACCACACCTTCGGAGTCCCGCTGGTCAAGACCAAGAGACCGGTCATCTCCTGCAACATCTGCCAGATCCGCTTCAACTCCGAGaGCCAGGCAGAGGCACACTACAAGGGGAACCGGCATGCCCGTCGCATCAAGGGCATCGAGACGTCCAAGACCCGCCCCTCCGAGCCTGACAACCCCACACCTGCGCCCACGGCCTCGCCCTCGCCCCCCGGCCCCCTCACGGCAGCTCCCCTCTCAGACAGCAAGCCCAGTCGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU65199 lncRNA upstream 401873 13686839 ~ 13687780 (+) True G52100
TU65130 lncRNA upstream 612675 13476750 ~ 13476978 (+) True G52044
TU65030 lncRNA upstream 774601 13313590 ~ 13315052 (+) True G51970
TU65029 lncRNA upstream 777195 13311329 ~ 13312458 (+) True G51969
TU65028 lncRNA upstream 778880 13309616 ~ 13310773 (+) True G51968
TU65363 lncRNA downstream 36083 14128487 ~ 14128691 (+) True G52234
TU65529 lncRNA downstream 450235 14542639 ~ 14545754 (+) True G52361
TU65532 lncRNA downstream 460492 14552896 ~ 14553241 (+) True G52364
TU65540 lncRNA downstream 468315 14560719 ~ 14561249 (+) True G52372
TU65542 lncRNA downstream 470041 14562445 ~ 14562710 (+) True G52374
AMCG00008889 mRNA upstream 75916 14007598 ~ 14013737 (+) True AMCG00008889
AMCG00008888 mRNA upstream 83640 13985171 ~ 14006013 (+) True AMCG00008888
AMCG00008883 mRNA upstream 106023 13957368 ~ 13983630 (+) True AMCG00008883
AMCG00008884 mRNA upstream 140663 13942823 ~ 13948990 (+) True AMCG00008884
AMCG00008886 mRNA upstream 168026 13906302 ~ 13921627 (+) True AMCG00008886
AMCG00008892 mRNA downstream 10947 14103351 ~ 14109000 (+) True AMCG00008892
AMCG00008898 mRNA downstream 21057 14113461 ~ 14141914 (+) True AMCG00008898
AMCG00008900 mRNA downstream 50802 14143206 ~ 14144894 (+) True AMCG00008900
AMCG00008899 mRNA downstream 63416 14155820 ~ 14163655 (+) True AMCG00008899
AMCG00008896 mRNA downstream 135313 14227717 ~ 14245887 (+) True AMCG00008896
TU65027 other upstream 780223 13306732 ~ 13309430 (+) False AMCG00008856
TU64983 other upstream 832013 13254178 ~ 13257640 (+) False G51939
TU64968 other upstream 864707 13222320 ~ 13224946 (+) True G51928
TU64845 other upstream 1097161 12980804 ~ 12992492 (+) True AMCG00008837
TU64826 other upstream 1162859 12925238 ~ 12926794 (+) True G51812
TU65505 other downstream 389517 14481921 ~ 14483255 (+) True G52349
TU65523 other downstream 435414 14527818 ~ 14540958 (+) False AMCG00008910
TU65601 other downstream 699765 14792169 ~ 14794972 (+) False AMCG00008920
TU65600 other downstream 699940 14792344 ~ 14794972 (+) False AMCG00008920
TU65619 other downstream 714893 14807297 ~ 14809286 (+) False AMCG00008919

Expression Profile