RNA id: AMCG00008896


Basic Information

Item Value
RNA id AMCG00008896
length 7371
RNA type mRNA
GC content 0.62
exon number 31
gene id AMCG00008896
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14227717 ~ 14245887 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAAGTGTCTGAAAGTGGACGAGTATGTGAAACAGATCAGTAAGGTGCAGGACGCTGACAGACTGTACACACAGCTTGAGGGCCTTGTTCGGGGTGATGGCCCTTGTACGGAACAGCGCCTGGTGTGTGACCGTGTACTTCGGGCCTGCAACCAGCAGCTGGGGGCAGCCGGCGGGGAGCAAATGGACCCGGGGCTCATGGGCCAACTGGTAGCACTGGCGGAGCTTGCACTGCGCGGGTATGAGGCGGCGGGTGCCCAGCAGGCACCGCTCTACATTGAGAAGATCGTCTTCCACCTCCTCAGGAACCTGTCTGCCCGTGGTGCCGGGGGGGCCTGCCGCACCTTGGGGGCACTGCTGTACAGCCGCCTGGTCAGCACTGCAGAGAGCGAGGACTTTGGGGTGCTGGTCCGGAGCTGCTTTGCGGTGCTGTGGAAGAGCGCGGCGGGGGAGGGCGGCGAGGGGGACCCCCAGGCTAGGCTGAGCGGCCGGCTGCAGGCTACTGCCTTCCTGCTACTGCACAACGGCGCCACCCTCTCCTCCCCTCAGCCCCTCCCAGACGGTGGCCCCTCCCTGCTGTTGCGTCACTGCGAGGCAGCCCTGATGGAGTACGAGGCCAATCGGGGACAGCTCTGTGAGGCCGACGCCACCATTTTGTTGAAGGAGATGGATCGCTTCCTCCTGCAGCCATTGCTCCAGAGACTGCGGCGGAGTCAGGGGTCAAGGCCAGACGAGGGGGGCCTTCAGCCCCTCTGCAGCTGGGCTGTTCTGTGTGAGATTGTGCTGCAGAACTGTAAGCAGTTCAGCAAGGCAGGCTGCTGGGGAATGGCAGCCACCCACCTGGAGCAGGCCACAGCCTGGGGCCGGGAGCTGTGCCCCTCAACCCATGCACACACGCTCTGCCCCTGCCTCAGCCTAGTTCTTGTCCGGCACGGGGTGAGCGTGCTCCAGGCCCTTTGTGCAGAGGGGGACTGCGGGCAGCCGTTGACACAGTGTGCCCGTGCCTTGAGGGCACTCCCCTCGTCCTGTGCCCCCCCTCTTGGCATGCTGGGTGGCTGCCAGTTTGTGGCCTGGGCGCTGGAGGCAGGGCTTCAAAGACCTGAGGGCCGAAGCCACACCCGGGTGCTGAACGGTCCTGCCTTGCTGGCCTGGTTCTCCTTCTCCGAGGAGTATCAGGACCTGCTGCAAAGACGCCTGGACAGCGTGACGTTGTCCCCATCGGAGCGCCGGCTCCTACAGCAGACGCACTTCCACAGCCTGCACCAGGGCTTTCTCGCTGCCTACGACAGCCTTCTGGCAGCACAGctggagGAGGCTGAGGTCCTGCGCCGGGTGCTGCTGTACTGTCGTGCTGCGGCCGTCGCTATGCTGGCGAAGCAGGAAGCTCTGCCTGCCCCTGAGCAAGAGGAGCACTTTGTCAAAGCTGCCAGCGATGTCAGTAACCTGGCCTGTGCACTGTACAACCAGAAGTGCTACAGCGAGGCCAGCGCTCTGGTGCAACTGTTGTGCGAGGAGCTCGGCCGACCTTCCTGCCCTCCTCTGCCCCTGGACAAGCTGCAGCGGGCGTTCCTGGTAGCAGTGCAGAGCTCGCGGAAGGAGGGTCAGTTGGACCAGGCCCTGGGCTGGGTGGTGCGCTGGCTGCGGGCACTGAGGGACCAGGTGATCCAGCACATGGTCGAGCCGGTCTCCCTGTGGGTCAAGACCAAGGGCGACGCCGCACGGGCTGGGTTGGAGGAGACCCAGCTCAGGACACTGAAGGACGGGTTTGAGGGCAAGGAGCCGGCCGAGGAGGTGCTCCTGGCGCTGCTGCAGGAGGAGCTCAGTGCGTACCGTAGCGTTGCCGGCGACACAGCGCAAGAGCGCTACAACACGTTGTGTGACCTGTTGGACATCTGCCATGAGGGCAGCGCCCACACACATCTGCGCGCTGCCCTGCTCTGTCAGCTCGCCCAGCTGCTCTGCTACAACAACCTCGCCCTCCACACTGACTGCTCTGCCCTGGACTCTATCCAGGAGGCCCTTCGCCTGCTGGAGCTTGAACCTGAGATGGCGGAGAACCAGGCCTGTCTGCAGGACGACCGGGCACACGCCTCGCTGTGGCTCTACATCTGCACCCTGGAGAGGAACCTgcaggagGCGGTGCAAATGGAACAGCGTGTGCGGGCAGCAGAGGAGAGGGGTCAAATGGCTTTGGACGACGAGACGCCCAATGACCTGGATTACGAGGAGCGACAGCAGGACAGCCAGCTGGTGTATAACGGCCTCCGCCTCAGCCTGGTGGCCGACAGCGAGCAGTCCCAGCCGCTGGACCGTGCCCTGGGTCTGTGGCGGGAGCTGCTGTCCGGGGGTGGCCTACCTGCAGTGCGCAGTGTCCAGCAGACCGCCACCTCACTGCACCTCACAGCCGCCCTGTACAGACTGATGGGCAAGTCCCTGCAGGCCCTGGAGAGTTACTCTCTGGCTGCCCGACTCACTGGAGCTATTGGTGAAGGCCGCAGCCCTGCCACTGCACTGTGCCACTCAGCCAAGCTGCTGCTGGAGATGGGTGCCCCCACCCTGGCACAGCCCCAGCTGGAGGCTGCGGAAGCCTGTCTGTCTAGCGATGACCTTGGCTCAGAGggcctctctctcctccgcCTGTTGTGTGCACTGCTGAGGAGCCAGCTGTGCTGTGACACTGGGCAGgtggaggaGGGTGTGTCTCACCTGGCCCAGGTGTTGCAGAAACTAGCAGGACAGAAGCAGACCAAGAGCTGGTGCCTCCTGCGTGCCAGTGTCATGCAGACGGTGGGCACCTACCTGAGCCTGCCTACCTCTGTACTCCCCCCTTCTCAGCGCCTCCAGATCACCCAGCATGGGTGGCGCAGTCCTGATGCAGCGCTGAGCGAGAGCCGCAAGCTACTGTGTAGTGTGGTGGTATCGTTGATGGGTAACGGCCTGATCGGCAACACCAAGACAATCGTCAACACACGCTTCGTGGACCAAGGAGAGAACGTGCTGCAGAAGTGGCAGGTGCTGGCTGAGGTGGTGGGCTGCTCGCGGCGGCTGGTGTTGGTGTACAGCCAGGTTGGGGCCGCCTGCGAGGCCAGGGCAGTGTGCCTGGAGGCCCTGAGGCTGACCGCCAAGTTGCAGACGCTCCGGCACTGGGCTGAGTTCCTGTTGCTGAAGGcagagctggagctgcagcGGGGGGAACGTGAGCTGAGCGGCCTGGACCTGCAGCATGTCCGAGAGCTGCTGGAGCAAGGCATTGATCCCAGCAGCTGTGCTGAGAGGAGGCCAGGGGTGAAGATCCAGCCAAAGAAGGGCCGCACACTGAAGAAACATGAGCCAGTGGCACCCTCCGCTAACCAACATGCCATGCAGGAGGAGGGTGAGTTTCTCAGCAGCCGGGTGGCGTTCCCCCGTGAGGTGATCGACACTGTGCAGGAGTGGAACCTGACCTCATCCCCGCCGCTGCGCCGGACAGCACCCCGCTGGCTGTCCGCCCTGGCGCATCACCATAACTGCGTCTGCCCCTGCTGCAGTGACCCCAGCCTGGCCCGAGTGTGTGTACACTGGGCCGCCGCCCGTGCTGAGCTTGACTCCCCTGTGGGGCTGGTGTCTGGTGAACAGGGAGCAGGGCGGGAGAGTCGGAAGCTGTTTCTGCTTGGCCTCTCTCGCTGCCGGGCTCTGTCCGCCCAGCTGGGTATGGCGCTGGCTCAGCTGGGTTTTGGCAGCGCCGCTCCTGGCAAGCCTGCTCCCTCTCTGGGCTTCCTGCAGGACCTGGTGGGCCGGATCTACCTGCGCCTGGCATGCAGCAGCCTGGACACACCCCCTGCCCAGAAACCTAGTGCCACCTGGGAGCTCCTGGACGCTGGCCTGTCTGCCCTGGCCCAGGCCACTGCCCCCGAACTGCTGCCCCTCCGTGCCGGCCTGCTGGCCACCAAAGCCCTGGCCTTGATTTATGCCCTGGCCGCCCAGAGAGACCGTCACCTGGTGGAACTCTTCTCCCCATCCTGGGCTTGGAACCCACCACCCAGAGAGAAACTGGACaagcaggaggaggaaggagtGGGTGGCAAACTGAAGCCCAAGACTCCTCAGCACCTTGCTACTCAACCTGCAGCCAGGAaggtgagggagggaggcagcagGCCCACACCAGCCAAGGCCAAGCTAAAGAAGCCAGTCTCTTCTGCCAAGACCCCAGTGATCAAGCAGTCTGCGGTGCTGGAGGTCACTGTGCCTGGAGACCCTTACTCCTTTGACTGTGCTTCCCCTGCCCCAGCACCTCGCACCCCGATCCAGTCAGGCCGCCCTGACACAGGGGGGCGGCGGGGAAAAGGCAGGACTGTCCTCAAGGCCCGTGTGCCGTTCCAAGTGTATGAGGAGACGTCGCCCCCTGCGGACACTCACCCGGCGGTGCCCGCCGCACCAAAACGCAACACCCGCTCTCGCTTCAAGGTCGTGTTCAGTGATGAAAGTGACGTAGAAGAAGCTGACAACGTCCCAGTAGAGCAGCCCAGCACTGGGGGGTCCAGGAAGTCAAGACCAGGCCGGGCCACCAGCACAACCAAACCACTGCAGGGCCCCAAGAAACCGGGCAGAAAAAGAGTAGGAAAAACCTCACTCACCACTGCCCTGCCCCCCGCTGTCTTCTCTCCCTCCACTGAGGAGGACTCCTTTGCCCAGCCCAGCTCTGCCCCTTGCAGAGACCAGACCCGGAAGGTGGCTCGCTCTAGTGCCGCCCTGGTGACCAGGCGAGGTGTAAGAGCTGCCCAGCAGCCCGAGCCAGAATTAATGAGGACCattgaggaggaggaagaggagggggatcTGGGGCTGGACACCAGTCTGGAGCTGCTCAGAGCCTCTGACACTGAAGAACAGGACACCACAGCTGGCAGACGGCCCAGCCACCCACAGAGGTCCATCCCAGACGGAGAGTGTGAGGTGCTGAGGCGTGACCAGGGGATGGAGGTTCGCCATGAGACTCTAGCTGAGACCAGGAGAGGCCTGCACCCCAATGCCCCCCTCCCCAGTGCCCTGCACCCCAGCACTGGGCCAGAGGGCCTCTCGTTGCAATGTGTGCAGACTGTGTTGCAGACAGTGCTGGTGTCGCTGcagcactgcccccccaccacgcTGTACACCCGTGTGTGCCACCTCCTGTCTCTTTGCCAGGGTGATGCCCTGCCATTGCTCACCGCCCTGCTGCACAGCGAGTCGCTGGCTGTCTCCGCACGCCACACCATGGCCCGACACCTGCATAGCCGGCTCAGGAGGCTGAGGAAGGCGTCGGGCCCAGACCTGGCAGAGCGTCTGCAGGAGCTGAGTCTAGGGGACCCGGCCCCCACCACCAACGAACCCTCCCTGCAGCTCCTCACCCAGCTCGAGCAGATCTTCCAGTTCCCTGCCCTTGAACCTGGGTCCTTCCCCCAGAGCCACTGCCAGGTCTTCCAGGAGCAGCTAGGCTCCATCCCCCCTGGTGTCACGGTGTGTCTGCTGTCTGTGGTCAGCCTGCTTCCCGGGGAGGTGGGGGACACCGTGCTGCTGACCCGGCTGGAGAGAGACGCCCCCCCAATCACTGTCCGCATCCCCACCGCACATGGAccgaagCCGATCAGTGTGCTGCTGCAGGAGTTCGAGGccgtgcagcagcagcagaaggtgATCAGTAATGTGACGGACAAGGTGGAGTGGTGGGAGGGCCGGCGGCGGCTGGACACCAGGATGAAGGTGCTGTTGGAGGCGATGGAGGAGCAGGTGCTTGGCTGTTGGCGGGGGCTCCTCTTGCCCTGCTCTCAGGACCCCGAGGTGGCCAAGCAGGCTGCACATGTGAGCCGTAGCCTGAGCGAGTGTGGCACCCAGGACTGCGAGGACCTGCTCAAGGTGGTGCTGTCTGCCTCAGCTCTCCTGTCACGTGCTGACCTGCTCTCCCTGGCAGGGGGGCTGTGCCCGAAGTGGCCTGACACAGCGCAGCACCTCCTGCAGACGGCCGTCTCCATGCTGAGGGACAGGGCAGACGTGCAGACGGACCAGCAGATCGAGGGACACCTCGTCCTAATGCTGGACAAGTACCTACAGAAGCTGCCGTGGGAGTGTGTGCCCAGCCTGAGGACCCGGCATGTTACACGCCTGCCCTGCCTGCACTTCCTGCTGGGACACTGCATTCTGAGGGAGCTGGACCCAGGCTCTGTCCTGCGACAGGGAGTGGACCCACAACGGGCATTCTATGTGCTGAACCCTCAGGCCAACCTGCCCAGCACCGAGGAGCGTTTCAGAGACTGGTTCACCAGTGAGGAGGGCTGGCAGGGTGTGTGTGGCACTGCCCCCACATCAGACCAAGTGCAGGAGGCCCTGGCCACAAAGGATCTGTACATTTACGCAGGGCACGGTGCAGGTGCACGGTTCCTTGACGGGGCAGGGGTGCTGCGGGGGGGCCTGCGGGCCGTccCGCTGGTCCTGGGCAACCTGTGGGATGTGACAGACCGGGACATCGATCGATTCATGGCAGCTCTGCTGCAGGGCTGGCTGAAGGGGGGCCATGGCGGGGCGCTGCTGACACACCTGGCTTCCTCCCGCCAGGCGCCGCGCCTCAAACACTTAATCGGGGCTGCACCCGTGGTGTACGGCCTGCCCGTGACCCTGCGCTGACACCCCCCCACTACTGCTGGACAGCACAGGGGGGCAGGGACCCACTGGCCTGAACAGAATAGTACAATCATTGTTCACTCtcactgcacagcactgcagcCATGGCTGCCTCACCATGCggtttgggttttgttttttaaactttctcACTTCTAAAGAGTAATGGGGAACAAGGGCAACTGCATTGCAACCCTCCAACACATACTTACCAGAGTAACACTTTAGTcaggtttccttttctttctttttttaataaaccctTTGCTTCCTTTACAACCACAGCTCAATGAAGTCAATGCAGTATTTGCAGAGATGTGTCTGGGAGAGCGAGTGTATCCCGAGCTTTATGTGCAGTAGCAGTAACACAGCCACTAGCGGGTGACAACTGTAAACCAGATCACTGACAATTTCCTCAATTTCTTAAGTGAGTGACTGGAATATTGAATGCAACTCTCCAGTTAACTAAAGTGTTGAATTGCCTGCAGTGGGTCCAGGTGCTATGTGAAAGTGCTTAAACTTGGCTCATACAAAACTGGAGAACTGAGAGGGAATGTCACTCAGGTTTTCTGCAGCTTATGATGTGTGATAGTctaaatttactttttaaatgtatgtatgtaatgtataaccatttgatttaattttgttttaaagccagTTAAGTTATTTTAACTCCATGTAAATCTGGAttaataatctttttttctaataaagcagaaaaactaaacGACA

Function

GO: NA

KEGG:

id description
K02365 ESP1; separase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU65363 lncRNA upstream 99026 14128487 ~ 14128691 (+) True G52234
TU65199 lncRNA upstream 539937 13686839 ~ 13687780 (+) True G52100
TU65130 lncRNA upstream 750739 13476750 ~ 13476978 (+) True G52044
TU65030 lncRNA upstream 912665 13313590 ~ 13315052 (+) True G51970
TU65029 lncRNA upstream 915259 13311329 ~ 13312458 (+) True G51969
TU65529 lncRNA downstream 296752 14542639 ~ 14545754 (+) True G52361
TU65532 lncRNA downstream 307009 14552896 ~ 14553241 (+) True G52364
TU65540 lncRNA downstream 314832 14560719 ~ 14561249 (+) True G52372
TU65542 lncRNA downstream 316558 14562445 ~ 14562710 (+) True G52374
TU65545 lncRNA downstream 330549 14576436 ~ 14576682 (+) True G52377
AMCG00008899 mRNA upstream 64062 14155820 ~ 14163655 (+) True AMCG00008899
AMCG00008900 mRNA upstream 82823 14143206 ~ 14144894 (+) True AMCG00008900
AMCG00008898 mRNA upstream 85803 14113461 ~ 14141914 (+) True AMCG00008898
AMCG00008892 mRNA upstream 118717 14103351 ~ 14109000 (+) True AMCG00008892
AMCG00008893 mRNA upstream 135313 14089653 ~ 14092404 (+) True AMCG00008893
AMCG00008895 mRNA downstream 4359 14250246 ~ 14253618 (+) True AMCG00008895
AMCG00008897 mRNA downstream 8412 14254299 ~ 14271663 (+) True AMCG00008897
AMCG00008894 mRNA downstream 33453 14279340 ~ 14281471 (+) True AMCG00008894
AMCG00008901 mRNA downstream 47522 14293409 ~ 14308544 (+) True AMCG00008901
AMCG00008903 mRNA downstream 83444 14329331 ~ 14361438 (+) True AMCG00008903
TU65027 other upstream 918287 13306732 ~ 13309430 (+) False AMCG00008856
TU64983 other upstream 970077 13254178 ~ 13257640 (+) False G51939
TU64968 other upstream 1002771 13222320 ~ 13224946 (+) True G51928
TU64845 other upstream 1235225 12980804 ~ 12992492 (+) True AMCG00008837
TU64826 other upstream 1300923 12925238 ~ 12926794 (+) True G51812
TU65505 other downstream 236034 14481921 ~ 14483255 (+) True G52349
TU65523 other downstream 281931 14527818 ~ 14540958 (+) False AMCG00008910
TU65601 other downstream 546282 14792169 ~ 14794972 (+) False AMCG00008920
TU65600 other downstream 546457 14792344 ~ 14794972 (+) False AMCG00008920
TU65619 other downstream 561410 14807297 ~ 14809286 (+) False AMCG00008919

Expression Profile