RNA id: AMCG00008898


Basic Information

Item Value
RNA id AMCG00008898
length 1341
RNA type mRNA
GC content 0.62
exon number 4
gene id AMCG00008898
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14113461 ~ 14141914 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ACAGAGACAtggtgagagagacagagagacagacagagacagcgACCTGGACACAGAGGGAGTTCACTTGGTCTCGTCCTGTTGAGAGCTCTGCTGAGGATGCCATCAAACAACACCACCAAGGTTGACACCTTCTCTTGCAGCCACCCCAGCGTGGAGGGGTACCGCTACTTTGGGGTGCTGTGGGGGTCGGTGGTGGCGACGGTTGGCACAGTGGGCAACATGATGACCCTGCTCGCCTTCCTGCGGGATCGCCGCCTGCGCACGCCCTTCAATGCACTCATCTTCAACCTGGCGGTGGCCGACCTGTTGTACTGCGCCGCGCTACAGCCCACCTCTGTGGACACCTACCTGCACCTGCGCTGGCGCGGGGGGGAGATTTGGTGCCGCGCCTTCGGGCTGCTGCTCTTCCTCTCCAACAGTGTCTCCATCCTCACGCTCTGCCTCATCGCCGCTGGGCGCTACCTCCTGGTGACACGGCCGGCCACCTCCCAGCGACTGCTTTCACGCCGAGGCCTGGCCCTGCTGCTGCCTGCCACCTGGGCCCTGGCACTGGCCAGCTTTGGCCCACTTTGGCCCATCTATGTCTTCACCCCCCAAgTATGTACATGCAGCTTCCATCGCACCAGGGGGCGCCCTTACAccaccctgctgctgctgttctacTTTGTGTTCAGCCTGGGCTGTGTGGGGCTCTTCTACTTTCTGCTGCACCGCCGGGTCAGAGAGGCCTCCCGTGCGCTGCACCGGTACCGCCTGAGCCGCCGTTCGCAGGCCAAGCCTCCTGGGGCCAAAGGGGGGAGTGGGGCTGAGGACAGCGGGCAGCCCACTCACAGCGTGGAGATCAGCAGTTCCGAAAACAACAGTGTTGTGGAGAAATCAGAGAGAACCCTCCAACCAGACTGCCAAGAAATCCAAAGCACCCAATATGCCCCTGCTCCAGCCCCTGCCCCCTCAATTGCCACTGCCCCtacccctgcccctgcccctgcccctgtcCACTCTCTTGCCACTGTCACCCCTCCTGCCCCTGTCCCCTCTCCTGCCCCTGCTCTGCCCCCTGCTACATCCTCCCCTGAGCAGGATGCGGAGGTGGGCCGTGTGACCCGTATGTGCTTCGCAGTGTTCCTATGTTTCGTGCTGGCCTTTGCCCCCTTCCTGTTGCTCAACATGGTGGACAGCAAGGGCCACGCCCCGCAGCCTCTGCACATGTTCTGTGCCAACCTGACATGGCTGAACAGCTGCATCAATCCCGTGCTATTTCATATGGTGCCTGTCTGCCTGCTCGCcctccacttcctgtttcccaGACTGGCCGTGCGCATGCCCTGTCACAACTGA

Function

GO: NA

KEGG:

id description
K08421 GPR84; G protein-coupled receptor 84

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU65199 lncRNA upstream 425681 13686839 ~ 13687780 (+) True G52100
TU65130 lncRNA upstream 636483 13476750 ~ 13476978 (+) True G52044
TU65030 lncRNA upstream 798409 13313590 ~ 13315052 (+) True G51970
TU65029 lncRNA upstream 801003 13311329 ~ 13312458 (+) True G51969
TU65028 lncRNA upstream 802688 13309616 ~ 13310773 (+) True G51968
TU65529 lncRNA downstream 400725 14542639 ~ 14545754 (+) True G52361
TU65532 lncRNA downstream 410982 14552896 ~ 14553241 (+) True G52364
TU65540 lncRNA downstream 418805 14560719 ~ 14561249 (+) True G52372
TU65542 lncRNA downstream 420531 14562445 ~ 14562710 (+) True G52374
TU65545 lncRNA downstream 434522 14576436 ~ 14576682 (+) True G52377
AMCG00008892 mRNA upstream 4461 14103351 ~ 14109000 (+) True AMCG00008892
AMCG00008893 mRNA upstream 21057 14089653 ~ 14092404 (+) True AMCG00008893
AMCG00008889 mRNA upstream 99724 14007598 ~ 14013737 (+) True AMCG00008889
AMCG00008888 mRNA upstream 107448 13985171 ~ 14006013 (+) True AMCG00008888
AMCG00008883 mRNA upstream 129831 13957368 ~ 13983630 (+) True AMCG00008883
AMCG00008900 mRNA downstream 1292 14143206 ~ 14144894 (+) True AMCG00008900
AMCG00008899 mRNA downstream 13906 14155820 ~ 14163655 (+) True AMCG00008899
AMCG00008896 mRNA downstream 85803 14227717 ~ 14245887 (+) True AMCG00008896
AMCG00008895 mRNA downstream 108332 14250246 ~ 14253618 (+) True AMCG00008895
AMCG00008897 mRNA downstream 112385 14254299 ~ 14271663 (+) True AMCG00008897
TU65027 other upstream 804031 13306732 ~ 13309430 (+) False AMCG00008856
TU64983 other upstream 855821 13254178 ~ 13257640 (+) False G51939
TU64968 other upstream 888515 13222320 ~ 13224946 (+) True G51928
TU64845 other upstream 1120969 12980804 ~ 12992492 (+) True AMCG00008837
TU64826 other upstream 1186667 12925238 ~ 12926794 (+) True G51812
TU65505 other downstream 340007 14481921 ~ 14483255 (+) True G52349
TU65523 other downstream 385904 14527818 ~ 14540958 (+) False AMCG00008910
TU65601 other downstream 650255 14792169 ~ 14794972 (+) False AMCG00008920
TU65600 other downstream 650430 14792344 ~ 14794972 (+) False AMCG00008920
TU65619 other downstream 665383 14807297 ~ 14809286 (+) False AMCG00008919

Expression Profile