RNA id: AMCG00008900



Basic Information


Item Value
RNA id AMCG00008900
length 329
RNA type mRNA
GC content 0.58
exon number 2
gene id AMCG00008900
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14143206 ~ 14144894 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGGTCCCCCTGCAGTTCCAGGTGACGTTCCGTCGGGCGGAGGGCTACCCCATCGACCTGTACTACCTGATGGACCTGTCATACTCCATGAATGATGACTTGCAGAACATCAAGAACTTGGGGCAGGAGATCCTGAGCGCACTGACCAGTGTCACCAAGTCCGTCAGGATCGGGTTTGGCTCGTTTGTGGACAAGGTGGCGCTGCCGTATGTCAGCACAGTGCGCTCCAAGCTGAAGAACCCCTGCCCCAATCGACTGACCTTCTGCCAGCCAGCCTTCAGCTTTCGCAATGTGCTGCCCCTCACCAATGATGCTGCCGAATTCCAGCGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU65363 lncRNA upstream 14515 14128487 ~ 14128691 (+) True G52234
TU65199 lncRNA upstream 455426 13686839 ~ 13687780 (+) True G52100
TU65130 lncRNA upstream 666228 13476750 ~ 13476978 (+) True G52044
TU65030 lncRNA upstream 828154 13313590 ~ 13315052 (+) True G51970
TU65029 lncRNA upstream 830748 13311329 ~ 13312458 (+) True G51969
TU65529 lncRNA downstream 397745 14542639 ~ 14545754 (+) True G52361
TU65532 lncRNA downstream 408002 14552896 ~ 14553241 (+) True G52364
TU65540 lncRNA downstream 415825 14560719 ~ 14561249 (+) True G52372
TU65542 lncRNA downstream 417551 14562445 ~ 14562710 (+) True G52374
TU65545 lncRNA downstream 431542 14576436 ~ 14576682 (+) True G52377
AMCG00008898 mRNA upstream 1292 14113461 ~ 14141914 (+) True AMCG00008898
AMCG00008892 mRNA upstream 34206 14103351 ~ 14109000 (+) True AMCG00008892
AMCG00008893 mRNA upstream 50802 14089653 ~ 14092404 (+) True AMCG00008893
AMCG00008889 mRNA upstream 129469 14007598 ~ 14013737 (+) True AMCG00008889
AMCG00008888 mRNA upstream 137193 13985171 ~ 14006013 (+) True AMCG00008888
AMCG00008899 mRNA downstream 10926 14155820 ~ 14163655 (+) True AMCG00008899
AMCG00008896 mRNA downstream 82823 14227717 ~ 14245887 (+) True AMCG00008896
AMCG00008895 mRNA downstream 105352 14250246 ~ 14253618 (+) True AMCG00008895
AMCG00008897 mRNA downstream 109405 14254299 ~ 14271663 (+) True AMCG00008897
AMCG00008894 mRNA downstream 134446 14279340 ~ 14281471 (+) True AMCG00008894
TU65027 other upstream 833776 13306732 ~ 13309430 (+) False AMCG00008856
TU64983 other upstream 885566 13254178 ~ 13257640 (+) False G51939
TU64968 other upstream 918260 13222320 ~ 13224946 (+) True G51928
TU64845 other upstream 1150714 12980804 ~ 12992492 (+) True AMCG00008837
TU64826 other upstream 1216412 12925238 ~ 12926794 (+) True G51812
TU65505 other downstream 337027 14481921 ~ 14483255 (+) True G52349
TU65523 other downstream 382924 14527818 ~ 14540958 (+) False AMCG00008910
TU65601 other downstream 647275 14792169 ~ 14794972 (+) False AMCG00008920
TU65600 other downstream 647450 14792344 ~ 14794972 (+) False AMCG00008920
TU65619 other downstream 662403 14807297 ~ 14809286 (+) False AMCG00008919

Expression Profile