Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00008942 |
| length | 1076 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 7 |
| gene id | AMCG00008942 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 15202268 ~ 15204656 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006742 | NADP catabolic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0009435 | NAD biosynthetic process | biological_process |
| GO:0050661 | NADP binding | molecular_function |
| GO:0033735 | aspartate dehydrogenase activity | molecular_function |
| id | description |
|---|---|
| K06989 | nadX, ASPDH; aspartate dehydrogenase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU65816 | lncRNA | downstream | 29902 | 15169322 ~ 15172366 (-) | True | G52594 |
| TU65736 | lncRNA | downstream | 153922 | 15043739 ~ 15048346 (-) | False | AMCG00008934 |
| TU65737 | lncRNA | downstream | 153922 | 15043739 ~ 15048346 (-) | False | AMCG00008934 |
| TU65738 | lncRNA | downstream | 153922 | 15043739 ~ 15048346 (-) | False | AMCG00008934 |
| TU65718 | lncRNA | downstream | 179140 | 14994916 ~ 15023128 (-) | True | G52513 |
| TU65849 | lncRNA | upstream | 33399 | 15238055 ~ 15239115 (-) | True | G52621 |
| TU65897 | lncRNA | upstream | 76240 | 15280896 ~ 15284268 (-) | True | G52666 |
| TU65916 | lncRNA | upstream | 211289 | 15415945 ~ 15477937 (-) | True | G52676 |
| TU65923 | lncRNA | upstream | 222260 | 15426916 ~ 15428651 (-) | True | G52683 |
| TU65933 | lncRNA | upstream | 302592 | 15507248 ~ 15513223 (-) | True | G52692 |
| AMCG00008937 | mRNA | downstream | 19702 | 15176616 ~ 15182566 (-) | True | AMCG00008937 |
| AMCG00008940 | mRNA | downstream | 50063 | 15136403 ~ 15152205 (-) | True | AMCG00008940 |
| AMCG00008938 | mRNA | downstream | 89973 | 15109783 ~ 15112295 (-) | True | AMCG00008938 |
| AMCG00008939 | mRNA | downstream | 115049 | 15079065 ~ 15087219 (-) | True | AMCG00008939 |
| AMCG00008933 | mRNA | downstream | 131487 | 15066924 ~ 15070781 (-) | True | AMCG00008933 |
| AMCG00008943 | mRNA | upstream | 97186 | 15301842 ~ 15328145 (-) | True | AMCG00008943 |
| AMCG00008944 | mRNA | upstream | 167889 | 15372545 ~ 15391050 (-) | True | AMCG00008944 |
| AMCG00008945 | mRNA | upstream | 194923 | 15399579 ~ 15400121 (-) | True | AMCG00008945 |
| AMCG00008951 | mRNA | upstream | 265018 | 15469674 ~ 15485870 (-) | True | AMCG00008951 |
| AMCG00008950 | mRNA | upstream | 309978 | 15514634 ~ 15528761 (-) | True | AMCG00008950 |
| TU65310 | other | downstream | 1218375 | 13943998 ~ 13983893 (-) | True | G52187 |
| TU65308 | other | downstream | 1253177 | 13938451 ~ 13949091 (-) | False | G52187 |
| TU65198 | other | downstream | 1515531 | 13685335 ~ 13686737 (-) | True | G52099 |
| TU65044 | other | downstream | 1877041 | 13320274 ~ 13325227 (-) | False | AMCG00008860 |
| TU65036 | other | downstream | 1892843 | 13307422 ~ 13309425 (-) | True | G51974 |
| TU65929 | other | upstream | 280726 | 15485382 ~ 15505517 (-) | False | AMCG00008951 |
| TU66056 | other | upstream | 632333 | 15836989 ~ 15837801 (-) | True | G52782 |
| TU66061 | other | upstream | 637008 | 15841664 ~ 15851809 (-) | False | AMCG00008964 |
| TU66062 | other | upstream | 637008 | 15841664 ~ 15851809 (-) | True | AMCG00008964 |
| TU66151 | other | upstream | 753011 | 15957667 ~ 15963617 (-) | True | G52834 |
