RNA id: AMCG00008945


Basic Information

Item Value
RNA id AMCG00008945
length 222
RNA type mRNA
GC content 0.59
exon number 2
gene id AMCG00008945
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15399579 ~ 15400121 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCACCCTCTCTGCCCCACCCCTCCAGCGGCGCCATCCACAGCCGCACCAGGGAACTGCAGGAGAACACCCACAGCCTGCACTCCGGACTGGACACTCTGGTCAACAAGAAACTCCCGCCTCCTCAACTTCCATTTCCTGTTGTCCTGTTTCCGCCGAGACTCACACAAAATCGACAGTTTCCTGAAAGTGCTGCGTTGTCGGGCAGCCAAGATGCGACCGGA

Function

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU65897 lncRNA downstream 115311 15280896 ~ 15284268 (-) True G52666
TU65849 lncRNA downstream 160464 15238055 ~ 15239115 (-) True G52621
TU65816 lncRNA downstream 227213 15169322 ~ 15172366 (-) True G52594
TU65737 lncRNA downstream 351233 15043739 ~ 15048346 (-) False AMCG00008934
TU65916 lncRNA upstream 15824 15415945 ~ 15477937 (-) True G52676
TU65923 lncRNA upstream 26795 15426916 ~ 15428651 (-) True G52683
TU65933 lncRNA upstream 107127 15507248 ~ 15513223 (-) True G52692
TU66004 lncRNA upstream 203704 15603825 ~ 15623991 (-) False AMCG00008957
TU66005 lncRNA upstream 203704 15603825 ~ 15610700 (-) True AMCG00008957
AMCG00008944 mRNA downstream 8529 15372545 ~ 15391050 (-) True AMCG00008944
AMCG00008943 mRNA downstream 71434 15301842 ~ 15328145 (-) True AMCG00008943
AMCG00008942 mRNA downstream 194923 15202268 ~ 15204656 (-) True AMCG00008942
AMCG00008937 mRNA downstream 217013 15176616 ~ 15182566 (-) True AMCG00008937
AMCG00008940 mRNA downstream 247374 15136403 ~ 15152205 (-) True AMCG00008940
AMCG00008951 mRNA upstream 69553 15469674 ~ 15485870 (-) True AMCG00008951
AMCG00008950 mRNA upstream 114513 15514634 ~ 15528761 (-) True AMCG00008950
AMCG00008956 mRNA upstream 142341 15542462 ~ 15596322 (-) True AMCG00008956
AMCG00008957 mRNA upstream 206822 15606943 ~ 15639130 (-) False AMCG00008957
AMCG00008958 mRNA upstream 249423 15649544 ~ 15660496 (-) True AMCG00008958
TU65310 other downstream 1415686 13943998 ~ 13983893 (-) True G52187
TU65308 other downstream 1450488 13938451 ~ 13949091 (-) False G52187
TU65198 other downstream 1712842 13685335 ~ 13686737 (-) True G52099
TU65044 other downstream 2074352 13320274 ~ 13325227 (-) False AMCG00008860
TU65036 other downstream 2090154 13307422 ~ 13309425 (-) True G51974
TU65929 other upstream 85261 15485382 ~ 15505517 (-) False AMCG00008951
TU66056 other upstream 436868 15836989 ~ 15837801 (-) True G52782
TU66061 other upstream 441543 15841664 ~ 15851809 (-) False AMCG00008964
TU66062 other upstream 441543 15841664 ~ 15851809 (-) True AMCG00008964
TU66151 other upstream 557546 15957667 ~ 15963617 (-) True G52834

Expression Profile