Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00008960 |
| length | 1045 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 6 |
| gene id | AMCG00008960 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 15856224 ~ 15863670 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0022627 | cytosolic small ribosomal subunit | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU66055 | lncRNA | upstream | 21755 | 15836985 ~ 15837809 (+) | True | G52781 |
| TU66036 | lncRNA | upstream | 95421 | 15763937 ~ 15764143 (+) | True | G52766 |
| TU65970 | lncRNA | upstream | 156549 | 15627840 ~ 15703015 (+) | True | G52717 |
| TU65931 | lncRNA | upstream | 345546 | 15513535 ~ 15514018 (+) | True | G52691 |
| TU65882 | lncRNA | upstream | 427963 | 15412001 ~ 15431601 (+) | True | G52651 |
| TU66090 | lncRNA | downstream | 16387 | 15880057 ~ 15895419 (+) | True | G52798 |
| TU66093 | lncRNA | downstream | 31760 | 15895430 ~ 15898067 (+) | False | AMCG00008965 |
| TU66120 | lncRNA | downstream | 89378 | 15953048 ~ 15955372 (+) | True | G52817 |
| TU66175 | lncRNA | downstream | 198170 | 16061840 ~ 16063714 (+) | True | G52856 |
| TU66180 | lncRNA | downstream | 221858 | 16085528 ~ 16085843 (+) | True | G52861 |
| AMCG00008954 | mRNA | upstream | 209291 | 15641691 ~ 15650273 (+) | True | AMCG00008954 |
| AMCG00008952 | mRNA | upstream | 218629 | 15633723 ~ 15640935 (+) | True | AMCG00008952 |
| AMCG00008953 | mRNA | upstream | 236161 | 15622818 ~ 15623403 (+) | True | AMCG00008953 |
| AMCG00008955 | mRNA | upstream | 251256 | 15599331 ~ 15608308 (+) | True | AMCG00008955 |
| AMCG00008949 | mRNA | upstream | 337268 | 15519629 ~ 15522296 (+) | True | AMCG00008949 |
| AMCG00008965 | mRNA | downstream | 33037 | 15896707 ~ 15910151 (+) | True | AMCG00008965 |
| AMCG00008967 | mRNA | downstream | 67646 | 15931316 ~ 15931979 (+) | True | AMCG00008967 |
| AMCG00008966 | mRNA | downstream | 79487 | 15943157 ~ 15951025 (+) | True | AMCG00008966 |
| AMCG00008970 | mRNA | downstream | 128443 | 15992113 ~ 15992550 (+) | True | AMCG00008970 |
| AMCG00008969 | mRNA | downstream | 188879 | 16052549 ~ 16054525 (+) | True | AMCG00008969 |
| TU65619 | other | upstream | 1050278 | 14807297 ~ 14809286 (+) | False | AMCG00008919 |
| TU65601 | other | upstream | 1064592 | 14792169 ~ 14794972 (+) | False | AMCG00008920 |
| TU65600 | other | upstream | 1064592 | 14792344 ~ 14794972 (+) | False | AMCG00008920 |
| TU65523 | other | upstream | 1318606 | 14527818 ~ 14540958 (+) | False | AMCG00008910 |
| TU65505 | other | upstream | 1376309 | 14481921 ~ 14483255 (+) | True | G52349 |
| TU66272 | other | downstream | 498432 | 16362102 ~ 16362511 (+) | True | G52942 |
| TU66345 | other | downstream | 716193 | 16579863 ~ 16583929 (+) | False | AMCG00008983 |
| TU66371 | other | downstream | 808833 | 16672503 ~ 16673542 (+) | True | G53028 |
| TU66558 | other | downstream | 1467222 | 17330892 ~ 17339674 (+) | True | AMCG00008995 |
| TU66686 | other | downstream | 1865696 | 17729366 ~ 17730660 (+) | True | G53298 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | TU224052 | True | 635 | TUCP | 0.47 | 5 | CI01000046 | 5274382 ~ 5276453 (+) |
