RNA id: AMCG00008967



Basic Information


Item Value
RNA id AMCG00008967
length 504
RNA type mRNA
GC content 0.63
exon number 2
gene id AMCG00008967
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15931316 ~ 15931979 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTGTGCAGTGAGTGGCAGTCTGAGGAGGGGGTCCCGTCTCTCAGTCTGGCCCTGCTGGACCGGGCCCTGGCAGCGGCACCAGTCCGGACTGACTCCCTGTGGTTGCTTGGTGCTGCCTGCCTCCTGCTTGCCTGCAAGCTGCGACAGGGAGGAGAGGGGCTGGGCTCTCGCCAGCTTTGTGCAGCCACCCCACACAGATACAGCACTGCACAGCTCAGAgagatgGAGCGTGTTGTCTTGACGACCCTGCGCTGGGATGTCGCCGCGGTAACCCCCCATGACTTCCTGCCCCACTTCCTTTCTGCTCTGGGGCTGGGGGAGAcacaggagcaggaggaggaggagagggaggggtgcAAAGGTCTTCTAACAACAATCCGTCGCCATGCAGACACCTTGGTCGCCATGTGCGTTTGTGATGTCCGCTTCTTGGGCACGCCTCCCTCCCTGATTGCTGCAGCAACACTCAACTCTGCCCTCAGGGGGTTGGGCTACAGGGGCCCT

Function


GO:

id name namespace
GO:0009799 specification of symmetry biological_process
GO:0009855 determination of bilateral symmetry biological_process
GO:0007368 determination of left/right symmetry biological_process
GO:0061371 determination of heart left/right asymmetry biological_process

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66093 lncRNA upstream 33249 15895430 ~ 15898067 (+) False AMCG00008965
TU66090 lncRNA upstream 35897 15880057 ~ 15895419 (+) True G52798
TU66055 lncRNA upstream 93507 15836985 ~ 15837809 (+) True G52781
TU66036 lncRNA upstream 167173 15763937 ~ 15764143 (+) True G52766
TU65970 lncRNA upstream 228301 15627840 ~ 15703015 (+) True G52717
TU66120 lncRNA downstream 21069 15953048 ~ 15955372 (+) True G52817
TU66175 lncRNA downstream 129861 16061840 ~ 16063714 (+) True G52856
TU66180 lncRNA downstream 153549 16085528 ~ 16085843 (+) True G52861
TU66185 lncRNA downstream 166261 16098240 ~ 16098446 (+) True G52863
TU66199 lncRNA downstream 276969 16208948 ~ 16210044 (+) True G52877
AMCG00008965 mRNA upstream 21165 15896707 ~ 15910151 (+) True AMCG00008965
AMCG00008960 mRNA upstream 67646 15859564 ~ 15863670 (+) False AMCG00008960
AMCG00008954 mRNA upstream 281043 15641691 ~ 15650273 (+) True AMCG00008954
AMCG00008952 mRNA upstream 290381 15633723 ~ 15640935 (+) True AMCG00008952
AMCG00008953 mRNA upstream 307913 15622818 ~ 15623403 (+) True AMCG00008953
AMCG00008966 mRNA downstream 11178 15943157 ~ 15951025 (+) True AMCG00008966
AMCG00008970 mRNA downstream 60134 15992113 ~ 15992550 (+) True AMCG00008970
AMCG00008969 mRNA downstream 120570 16052549 ~ 16054525 (+) True AMCG00008969
AMCG00008972 mRNA downstream 194162 16126141 ~ 16134060 (+) True AMCG00008972
AMCG00008978 mRNA downstream 498838 16430817 ~ 16451251 (+) True AMCG00008978
TU66074 other upstream 67662 15856224 ~ 15863654 (+) True AMCG00008960
TU65619 other upstream 1122030 14807297 ~ 14809286 (+) False AMCG00008919
TU65601 other upstream 1136344 14792169 ~ 14794972 (+) False AMCG00008920
TU65600 other upstream 1136344 14792344 ~ 14794972 (+) False AMCG00008920
TU65523 other upstream 1390358 14527818 ~ 14540958 (+) False AMCG00008910
TU66272 other downstream 430123 16362102 ~ 16362511 (+) True G52942
TU66345 other downstream 647884 16579863 ~ 16583929 (+) False AMCG00008983
TU66371 other downstream 740524 16672503 ~ 16673542 (+) True G53028
TU66558 other downstream 1398913 17330892 ~ 17339674 (+) True AMCG00008995
TU66686 other downstream 1797387 17729366 ~ 17730660 (+) True G53298

Expression Profile