RNA id: AMCG00008981


Basic Information

Item Value
RNA id AMCG00008981
length 246
RNA type mRNA
GC content 0.58
exon number 3
gene id AMCG00008981
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 16547617 ~ 16558958 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGCCAGAGTGAGCAGCAGAACTGCACCCACAGGAATGATGTCAGCATCATTTGTACAGTTGCCTCCTTTCCTGGGCTCATGCAGCTGGTCGTACGGGCGCAGCTCTCCTCCTCCATGGTGCCGTGGCTGCCTTCCTCCATGTCATGGCTGGGGTCGGGTTCATCACTGCTGGAGTCGAGTTCATCCTTGTGTGACGAGAACCACCACCAGCCCATGAGCACCAGCGCTCCAGGTAATGCGTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU66276 lncRNA upstream 151136 16396280 ~ 16396481 (+) True G52946
TU66275 lncRNA upstream 178203 16369172 ~ 16369414 (+) True G52945
TU66263 lncRNA upstream 202939 16344256 ~ 16344678 (+) True G52933
TU66261 lncRNA upstream 203541 16343016 ~ 16344076 (+) True G52931
TU66218 lncRNA upstream 227765 16311392 ~ 16319852 (+) True G52896
TU66368 lncRNA downstream 95235 16654193 ~ 16654923 (+) True G53025
TU66382 lncRNA downstream 120867 16679825 ~ 16683932 (+) False AMCG00008985
TU66396 lncRNA downstream 172431 16731389 ~ 16737398 (+) True AMCG00008988
TU66402 lncRNA downstream 187729 16746687 ~ 16750798 (+) True AMCG00008986
TU66419 lncRNA downstream 276654 16835612 ~ 16858245 (+) True G53069
AMCG00008978 mRNA upstream 96366 16430817 ~ 16451251 (+) True AMCG00008978
AMCG00008972 mRNA upstream 413557 16126141 ~ 16134060 (+) True AMCG00008972
AMCG00008969 mRNA upstream 493092 16052549 ~ 16054525 (+) True AMCG00008969
AMCG00008970 mRNA upstream 555067 15992113 ~ 15992550 (+) True AMCG00008970
AMCG00008966 mRNA upstream 596592 15943157 ~ 15951025 (+) True AMCG00008966
AMCG00008979 mRNA downstream 2064 16561022 ~ 16564235 (+) True AMCG00008979
AMCG00008983 mRNA downstream 20905 16579863 ~ 16587381 (+) True AMCG00008983
AMCG00008982 mRNA downstream 40702 16599660 ~ 16602244 (+) True AMCG00008982
AMCG00008984 mRNA downstream 101034 16659992 ~ 16671430 (+) True AMCG00008984
AMCG00008985 mRNA downstream 124758 16683716 ~ 16726295 (+) True AMCG00008985
TU66272 other upstream 185106 16362102 ~ 16362511 (+) True G52942
TU66074 other upstream 683963 15856224 ~ 15863654 (+) True AMCG00008960
TU65619 other upstream 1738331 14807297 ~ 14809286 (+) False AMCG00008919
TU65601 other upstream 1752645 14792169 ~ 14794972 (+) False AMCG00008920
TU66345 other downstream 20905 16579863 ~ 16583929 (+) False AMCG00008983
TU66371 other downstream 113545 16672503 ~ 16673542 (+) True G53028
TU66558 other downstream 771934 17330892 ~ 17339674 (+) True AMCG00008995
TU66686 other downstream 1170408 17729366 ~ 17730660 (+) True G53298
TU66780 other downstream 1358708 17917666 ~ 17920053 (+) False AMCG00009009