RNA id: AMCG00008988


Basic Information

Item Value
RNA id AMCG00008988
length 282
RNA type mRNA
GC content 0.56
exon number 2
gene id AMCG00008988
representative False

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 16731389 ~ 16737499 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TACCTGGAGTCAGTGGACGAAGGGGGTGTGGCCTGGAGGGCTGGCCTGCGAATGGGAGACTTCCTTattgagGTCGTCATGGTAACACGGAACCCGGAGATGGAGGACCTTGCCAGGAAGAAAGGTCAGTCAGACAGAGGGGTCAAGGGGTCAAGGAgtcaagagagagggagatggaggttaggggtcagaggtcagggacagagagacggaGGTCAGGGAGAAGTTTGGAAGAAGGTTAGTGatagaggtcagaggtcaaggaTCAGGGGTCAGGAGGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU66382 lncRNA upstream 52814 16679825 ~ 16683932 (+) False AMCG00008985
TU66368 lncRNA upstream 81823 16654193 ~ 16654923 (+) True G53025
TU66276 lncRNA upstream 340265 16396280 ~ 16396481 (+) True G52946
TU66275 lncRNA upstream 367332 16369172 ~ 16369414 (+) True G52945
TU66263 lncRNA upstream 392068 16344256 ~ 16344678 (+) True G52933
TU66402 lncRNA downstream 9188 16746687 ~ 16750798 (+) True AMCG00008986
TU66419 lncRNA downstream 98113 16835612 ~ 16858245 (+) True G53069
TU66480 lncRNA downstream 221014 16958513 ~ 16959031 (+) True G53115
TU66499 lncRNA downstream 272023 17009522 ~ 17009721 (+) True G53128
TU66502 lncRNA downstream 282186 17019685 ~ 17019964 (+) True G53131
AMCG00008985 mRNA upstream 10451 16683716 ~ 16726295 (+) True AMCG00008985
AMCG00008984 mRNA upstream 65316 16659992 ~ 16671430 (+) True AMCG00008984
AMCG00008982 mRNA upstream 134502 16599660 ~ 16602244 (+) True AMCG00008982
AMCG00008983 mRNA upstream 149365 16579863 ~ 16587381 (+) True AMCG00008983
AMCG00008979 mRNA upstream 172511 16561022 ~ 16564235 (+) True AMCG00008979
AMCG00008986 mRNA downstream 9188 16746687 ~ 16748393 (+) False AMCG00008986
AMCG00008991 mRNA downstream 60575 16798074 ~ 16798529 (+) True AMCG00008991
AMCG00008990 mRNA downstream 62100 16799599 ~ 16842718 (+) True AMCG00008990
AMCG00008993 mRNA downstream 423586 17161085 ~ 17161541 (+) True AMCG00008993
AMCG00008995 mRNA downstream 599221 17336720 ~ 17343676 (+) False AMCG00008995
TU66371 other upstream 63204 16672503 ~ 16673542 (+) True G53028
TU66345 other upstream 152817 16579863 ~ 16583929 (+) False AMCG00008983
TU66272 other upstream 374235 16362102 ~ 16362511 (+) True G52942
TU66074 other upstream 873092 15856224 ~ 15863654 (+) True AMCG00008960
TU65619 other upstream 1927460 14807297 ~ 14809286 (+) False AMCG00008919
TU66558 other downstream 593393 17330892 ~ 17339674 (+) True AMCG00008995
TU66686 other downstream 991867 17729366 ~ 17730660 (+) True G53298
TU66780 other downstream 1180167 17917666 ~ 17920053 (+) False AMCG00009009
TU66948 other downstream 1813273 18550772 ~ 18553960 (+) True G53520
TU67402 other downstream 4430732 21168231 ~ 21168575 (+) True G53911

Expression Profile