RNA id: AMCG00008991



Basic Information


Item Value
RNA id AMCG00008991
length 378
RNA type mRNA
GC content 0.63
exon number 2
gene id AMCG00008991
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 16798074 ~ 16798529 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTACTGGAAGCCAGGGCCAGTGACAGGCCACTCCGGGGACCTGAGCAACCCCCCAAGGCCAGCTGGGGAGGAGAGGTGGACTCCAGACAGCACGACCTCTGGGGAGGCGGGCGGCCCAGGCAGCCTCAATGCCTTGTCACAGAAAGCTGGTCAGAAAGCGGAGATCCATGGCCAAGGGAACATCTGGGAAGACGGTCGGCAGAACCGGATCCGGCCAGGCGGAACGAAGCAGAGACCGTCGCCCGGCCACGAGAGGGCGCACGAATCTGGGTACCACGCTATGATGGGTCGGTGGATTGGCAGACCTATCAAGCCCAACTCCAACAAGCGGCGTGGGCAGGCCAGTGGACGGAAGAGGAGATGGCCGGACAACTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66402 lncRNA upstream 47276 16746687 ~ 16750798 (+) True AMCG00008986
TU66396 lncRNA upstream 60676 16731389 ~ 16737398 (+) True AMCG00008988
TU66382 lncRNA upstream 114142 16679825 ~ 16683932 (+) False AMCG00008985
TU66368 lncRNA upstream 143151 16654193 ~ 16654923 (+) True G53025
TU66276 lncRNA upstream 401593 16396280 ~ 16396481 (+) True G52946
TU66419 lncRNA downstream 37083 16835612 ~ 16858245 (+) True G53069
TU66480 lncRNA downstream 159984 16958513 ~ 16959031 (+) True G53115
TU66499 lncRNA downstream 210993 17009522 ~ 17009721 (+) True G53128
TU66502 lncRNA downstream 221156 17019685 ~ 17019964 (+) True G53131
TU66508 lncRNA downstream 248485 17047014 ~ 17048098 (+) True G53137
AMCG00008986 mRNA upstream 49681 16746687 ~ 16748393 (+) False AMCG00008986
AMCG00008988 mRNA upstream 60575 16736746 ~ 16737499 (+) False AMCG00008988
AMCG00008985 mRNA upstream 71779 16683716 ~ 16726295 (+) True AMCG00008985
AMCG00008984 mRNA upstream 126644 16659992 ~ 16671430 (+) True AMCG00008984
AMCG00008982 mRNA upstream 195830 16599660 ~ 16602244 (+) True AMCG00008982
AMCG00008990 mRNA downstream 1070 16799599 ~ 16842718 (+) True AMCG00008990
AMCG00008993 mRNA downstream 362556 17161085 ~ 17161541 (+) True AMCG00008993
AMCG00008995 mRNA downstream 538191 17336720 ~ 17343676 (+) False AMCG00008995
AMCG00008996 mRNA downstream 624917 17423446 ~ 17453217 (+) True AMCG00008996
AMCG00008997 mRNA downstream 693952 17492481 ~ 17601018 (+) True AMCG00008997
TU66371 other upstream 124532 16672503 ~ 16673542 (+) True G53028
TU66345 other upstream 214145 16579863 ~ 16583929 (+) False AMCG00008983
TU66272 other upstream 435563 16362102 ~ 16362511 (+) True G52942
TU66074 other upstream 934420 15856224 ~ 15863654 (+) True AMCG00008960
TU65619 other upstream 1988788 14807297 ~ 14809286 (+) False AMCG00008919
TU66558 other downstream 532363 17330892 ~ 17339674 (+) True AMCG00008995
TU66686 other downstream 930837 17729366 ~ 17730660 (+) True G53298
TU66780 other downstream 1119137 17917666 ~ 17920053 (+) False AMCG00009009
TU66948 other downstream 1752243 18550772 ~ 18553960 (+) True G53520
TU67402 other downstream 4369702 21168231 ~ 21168575 (+) True G53911

Expression Profile