RNA id: AMCG00009027



Basic Information


Item Value
RNA id AMCG00009027
length 207
RNA type mRNA
GC content 0.51
exon number 2
gene id AMCG00009027
representative False

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 20061524 ~ 20062179 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGACTCGCCATGGAAAAAACTGTACAGCAGGAGCGGTCTACACTTACCatgagaagaagaaagacaCAGctgcCTCTGGCTATGGTACTCAGAGTGTGCGTCTTGGTAAAGATGCCATCAAGGACTTTGACTGCTGCTGCCTGTCCCTCCAGCCCTGCAGAGACCCCGTAGTCACGTGTGTATACCTGGAACCTATCAGTTACTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU67228 lncRNA downstream 55433 20005889 ~ 20006091 (-) True G53752
TU67227 lncRNA downstream 68272 19993033 ~ 19993252 (-) True G53751
TU67225 lncRNA downstream 91248 19965433 ~ 19970276 (-) True AMCG00009029
TU67224 lncRNA downstream 101170 19959573 ~ 19960354 (-) True G53748
TU67220 lncRNA downstream 103239 19956713 ~ 19958285 (-) True G53746
TU67255 lncRNA upstream 6797 20068911 ~ 20070175 (-) True G53776
TU67269 lncRNA upstream 37633 20099747 ~ 20100015 (-) True G53790
TU67293 lncRNA upstream 117685 20179799 ~ 20271814 (-) False G53809
TU67339 lncRNA upstream 523874 20585988 ~ 20586203 (-) True G53849
TU67389 lncRNA upstream 1000959 21063073 ~ 21063351 (-) True G53899
AMCG00009028 mRNA downstream 51279 19971515 ~ 20010245 (-) True AMCG00009028
AMCG00009029 mRNA downstream 94525 19961027 ~ 19966999 (-) False AMCG00009029
AMCG00009024 mRNA downstream 321525 19739288 ~ 19739999 (-) True AMCG00009024
AMCG00009023 mRNA downstream 332994 19722941 ~ 19728530 (-) True AMCG00009023
AMCG00009021 mRNA downstream 800413 19260287 ~ 19261111 (-) True AMCG00009021
AMCG00009030 mRNA upstream 46832 20108946 ~ 20110200 (-) True AMCG00009030
AMCG00009031 mRNA upstream 85983 20148097 ~ 20150492 (-) True AMCG00009031
AMCG00009037 mRNA upstream 679177 20741291 ~ 20741486 (-) True AMCG00009037
AMCG00009036 mRNA upstream 679379 20741493 ~ 20742332 (-) True AMCG00009036
AMCG00009040 mRNA upstream 1232210 21294324 ~ 21295469 (-) True AMCG00009040
TU66751 other downstream 2192828 17868386 ~ 17868696 (-) True G53355
TU66702 other downstream 2314481 17736589 ~ 17747043 (-) False AMCG00009001
TU66472 other downstream 3148225 16853029 ~ 16913299 (-) False AMCG00008989
TU66358 other downstream 3447063 16613224 ~ 16614461 (-) True G53017
TU66281 other downstream 3656398 16404710 ~ 16405126 (-) True G52951
TU67292 other upstream 138633 20200747 ~ 20264085 (-) True G53809
TU67291 other upstream 190790 20252904 ~ 20264085 (-) False G53809
TU67499 other upstream 2120974 22183088 ~ 22183565 (-) True G54003
TU68185 other upstream 5091152 25153266 ~ 25156338 (-) True G54544
TU68195 other upstream 5111563 25173677 ~ 25176378 (-) True AMCG00009100

Expression Profile