RNA id: AMCG00009032



Basic Information


Item Value
RNA id AMCG00009032
length 447
RNA type mRNA
GC content 0.62
exon number 3
gene id AMCG00009032
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 20263075 ~ 20263866 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCTGCCCGTCCCAGGCGTTCACTCCAAGGGCTTCACCGCCCTTTTTAAGGGTGGGGGCGTGGGGCACATGGGCTCTGACATCTCCCCGGTGGTTCCCACGGAACGGAATATGTATGCTGCCCGCCCCAGACAGGAACCCCAAGGGCTGTCCCGGCCTTTAAGGGAACCCCAAGGGCTGTCCCGGCCTTTAAGGGTGAGTGCGTGGGGACACATGGGCTCTGACATATCTCCAGTGGCTGCCACGAAATGGAATATGTATGCTGCCCGCCCCAGGCAGGAACCCCAAGGGCTGTCCCGGCCTTTAAGGCCGATCGAAAGGGAGTCGGGTTCAGATCCCCGAATCCGGAGCAGCGGAGACGGGCGCCGCAAGGCGTCCAGTGCGGTAACGCGACCGATCCCAGAGAAGCCAGCGGGAGCCCCGGGGAGAGTTCTCTTTTCTTTGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU67272 lncRNA upstream 50273 20136632 ~ 20212802 (+) True G53793
TU67270 lncRNA upstream 159075 20103780 ~ 20104000 (+) True G53791
TU67240 lncRNA upstream 232644 20030156 ~ 20030431 (+) True G53764
TU67238 lncRNA upstream 233071 20029294 ~ 20030004 (+) True G53762
TU67179 lncRNA upstream 277192 19983869 ~ 19985883 (+) True G53711
TU67296 lncRNA downstream 26912 20290778 ~ 20316786 (+) False G53812
TU67297 lncRNA downstream 26912 20290778 ~ 20317034 (+) True G53812
TU67307 lncRNA downstream 113924 20377790 ~ 20396356 (+) True AMCG00009033
TU67324 lncRNA downstream 185863 20449729 ~ 20544953 (+) True G53834
TU67345 lncRNA downstream 367582 20631448 ~ 20724272 (+) True G53855
AMCG00009025 mRNA upstream 313640 19939076 ~ 19949435 (+) True AMCG00009025
AMCG00009026 mRNA upstream 347169 19861278 ~ 19915906 (+) True AMCG00009026
AMCG00009022 mRNA upstream 715568 19544364 ~ 19547507 (+) False AMCG00009022
AMCG00009016 mRNA upstream 1888807 18361526 ~ 18374268 (+) True AMCG00009016
AMCG00009014 mRNA upstream 2042822 18219072 ~ 18220253 (+) True AMCG00009014
AMCG00009033 mRNA downstream 112929 20376795 ~ 20394819 (+) False AMCG00009033
AMCG00009034 mRNA downstream 192591 20456457 ~ 20461014 (+) True AMCG00009034
AMCG00009035 mRNA downstream 422279 20686145 ~ 20692387 (+) True AMCG00009035
AMCG00009038 mRNA downstream 734032 20997898 ~ 21087025 (+) True AMCG00009038
AMCG00009042 mRNA downstream 2166474 22430340 ~ 22441467 (+) True AMCG00009042
TU66948 other upstream 1709115 18550772 ~ 18553960 (+) True G53520
TU66780 other upstream 2343022 17917666 ~ 17920053 (+) False AMCG00009009
TU66686 other upstream 2532415 17729366 ~ 17730660 (+) True G53298
TU66558 other upstream 2923401 17330892 ~ 17339674 (+) True AMCG00008995
TU66371 other upstream 3589533 16672503 ~ 16673542 (+) True G53028
TU67402 other downstream 904365 21168231 ~ 21168575 (+) True G53911
TU67406 other downstream 1010745 21274611 ~ 21275354 (+) True G53915
TU67408 other downstream 1028375 21292241 ~ 21293901 (+) True G53917
TU67814 other downstream 3619451 23883317 ~ 23975906 (+) True G54263
TU68049 other downstream 4548752 24812618 ~ 24816534 (+) True AMCG00009085

Expression Profile