RNA id: AMCG00009034



Basic Information


Item Value
RNA id AMCG00009034
length 261
RNA type mRNA
GC content 0.44
exon number 2
gene id AMCG00009034
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 20456457 ~ 20461014 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTCTTGAATGCTCTGTTTCCTCCATTGTCTCCATTCTTGATCCTAGGTCCCCTTACAAAGAAACAGAATGATGATTTAGGTGATAATGAAGGTGCAGAGGATGAAGACATTCGTGAAAGTGGAAGCCCGAAGCCTGTAATGGTTTTTATCCATGGGGGCTCATACATGGAAGGCACCGGAAATATGTTTGACGGGAGCATTTTGGCAAGCTATGGTAATGTGATTGTCATCACGGTTAACTACCGGCTTGGGGTTTTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU67307 lncRNA upstream 60101 20377790 ~ 20396356 (+) True AMCG00009033
TU67297 lncRNA upstream 139423 20290778 ~ 20317034 (+) True G53812
TU67296 lncRNA upstream 139671 20290778 ~ 20316786 (+) False G53812
TU67283 lncRNA upstream 184643 20263496 ~ 20271814 (+) True G53803
TU67272 lncRNA upstream 243655 20136632 ~ 20212802 (+) True G53793
TU67345 lncRNA downstream 170434 20631448 ~ 20724272 (+) True G53855
TU67367 lncRNA downstream 273341 20734355 ~ 20734623 (+) True G53877
TU67368 lncRNA downstream 298655 20759669 ~ 20759870 (+) True G53878
TU67372 lncRNA downstream 444039 20905053 ~ 20905348 (+) True G53882
TU67374 lncRNA downstream 448880 20909894 ~ 20910148 (+) True G53884
AMCG00009033 mRNA upstream 61638 20376795 ~ 20394819 (+) False AMCG00009033
AMCG00009032 mRNA upstream 192591 20263075 ~ 20263866 (+) True AMCG00009032
AMCG00009025 mRNA upstream 507022 19939076 ~ 19949435 (+) True AMCG00009025
AMCG00009026 mRNA upstream 540551 19861278 ~ 19915906 (+) True AMCG00009026
AMCG00009022 mRNA upstream 908950 19544364 ~ 19547507 (+) False AMCG00009022
AMCG00009035 mRNA downstream 225131 20686145 ~ 20692387 (+) True AMCG00009035
AMCG00009038 mRNA downstream 536884 20997898 ~ 21087025 (+) True AMCG00009038
AMCG00009042 mRNA downstream 1969326 22430340 ~ 22441467 (+) True AMCG00009042
AMCG00009043 mRNA downstream 2152338 22613352 ~ 22631352 (+) True AMCG00009043
AMCG00009049 mRNA downstream 2171703 22632717 ~ 22648476 (+) True AMCG00009049
TU66948 other upstream 1902497 18550772 ~ 18553960 (+) True G53520
TU66780 other upstream 2536404 17917666 ~ 17920053 (+) False AMCG00009009
TU66686 other upstream 2725797 17729366 ~ 17730660 (+) True G53298
TU66558 other upstream 3116783 17330892 ~ 17339674 (+) True AMCG00008995
TU66371 other upstream 3782915 16672503 ~ 16673542 (+) True G53028
TU67402 other downstream 707217 21168231 ~ 21168575 (+) True G53911
TU67406 other downstream 813597 21274611 ~ 21275354 (+) True G53915
TU67408 other downstream 831227 21292241 ~ 21293901 (+) True G53917
TU67814 other downstream 3422303 23883317 ~ 23975906 (+) True G54263
TU68049 other downstream 4351604 24812618 ~ 24816534 (+) True AMCG00009085

Expression Profile