RNA id: AMCG00009038



Basic Information


Item Value
RNA id AMCG00009038
length 186
RNA type mRNA
GC content 0.56
exon number 2
gene id AMCG00009038
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 20997898 ~ 21087025 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGCAAACACAGCAAGTAACAACATGGCCTATAGGAAGGTGACAGCTGGACATGGTGCACCTTTGTACTCTCGGGACCTGGAAAGCGAGGAGCTACAGGGCACAGCCCTAGACCTGGAGTGGGACATGgagaaggagctggaggagccAGGGTTTGACCGGTTCCACCTGGAAGACAGCCCTTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU67376 lncRNA upstream 23711 20973977 ~ 20974187 (+) True G53886
TU67374 lncRNA upstream 87750 20909894 ~ 20910148 (+) True G53884
TU67372 lncRNA upstream 92550 20905053 ~ 20905348 (+) True G53882
TU67368 lncRNA upstream 238028 20759669 ~ 20759870 (+) True G53878
TU67367 lncRNA upstream 263275 20734355 ~ 20734623 (+) True G53877
TU67403 lncRNA downstream 144325 21231350 ~ 21231697 (+) True G53912
TU67404 lncRNA downstream 144729 21231754 ~ 21232205 (+) True G53913
TU67430 lncRNA downstream 486349 21573374 ~ 21573766 (+) True G53938
TU67438 lncRNA downstream 593720 21680745 ~ 21681260 (+) True G53946
TU67442 lncRNA downstream 684251 21771276 ~ 21771532 (+) True G53950
AMCG00009035 mRNA upstream 305511 20686145 ~ 20692387 (+) True AMCG00009035
AMCG00009034 mRNA upstream 536884 20456457 ~ 20461014 (+) True AMCG00009034
AMCG00009033 mRNA upstream 603079 20376795 ~ 20394819 (+) False AMCG00009033
AMCG00009032 mRNA upstream 734032 20263075 ~ 20263866 (+) True AMCG00009032
AMCG00009025 mRNA upstream 1048463 19939076 ~ 19949435 (+) True AMCG00009025
AMCG00009042 mRNA downstream 1343315 22430340 ~ 22441467 (+) True AMCG00009042
AMCG00009043 mRNA downstream 1526327 22613352 ~ 22631352 (+) True AMCG00009043
AMCG00009049 mRNA downstream 1545692 22632717 ~ 22648476 (+) True AMCG00009049
AMCG00009050 mRNA downstream 1582859 22669884 ~ 22686612 (+) True AMCG00009050
AMCG00009052 mRNA downstream 1617161 22704186 ~ 22705397 (+) True AMCG00009052
TU66948 other upstream 2443938 18550772 ~ 18553960 (+) True G53520
TU66780 other upstream 3077845 17917666 ~ 17920053 (+) False AMCG00009009
TU66686 other upstream 3267238 17729366 ~ 17730660 (+) True G53298
TU66558 other upstream 3658224 17330892 ~ 17339674 (+) True AMCG00008995
TU66371 other upstream 4324356 16672503 ~ 16673542 (+) True G53028
TU67402 other downstream 81206 21168231 ~ 21168575 (+) True G53911
TU67406 other downstream 187586 21274611 ~ 21275354 (+) True G53915
TU67408 other downstream 205216 21292241 ~ 21293901 (+) True G53917
TU67814 other downstream 2796292 23883317 ~ 23975906 (+) True G54263
TU68049 other downstream 3725593 24812618 ~ 24816534 (+) True AMCG00009085

Expression Profile