Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00009109 |
| length | 807 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 4 |
| gene id | AMCG00009109 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 25667520 ~ 25674012 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0030517 | negative regulation of axon extension | biological_process |
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0048013 | ephrin receptor signaling pathway | biological_process |
| GO:0048685 | negative regulation of collateral sprouting of intact axon in response to injury | biological_process |
| GO:0005887 | integral component of plasma membrane | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0005003 | ephrin receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68264 | lncRNA | upstream | 146206 | 25521019 ~ 25521314 (+) | True | G54609 |
| TU68263 | lncRNA | upstream | 149611 | 25516373 ~ 25517909 (+) | True | G54608 |
| TU68253 | lncRNA | upstream | 173947 | 25489874 ~ 25493573 (+) | True | AMCG00009104 |
| TU68232 | lncRNA | upstream | 253698 | 25404670 ~ 25413822 (+) | True | G54580 |
| TU68212 | lncRNA | upstream | 318537 | 25347278 ~ 25348983 (+) | True | G54566 |
| TU68374 | lncRNA | downstream | 733525 | 26407537 ~ 26407814 (+) | True | G54705 |
| TU68381 | lncRNA | downstream | 815137 | 26489149 ~ 26491161 (+) | True | G54711 |
| TU68395 | lncRNA | downstream | 864307 | 26538319 ~ 26540200 (+) | True | G54724 |
| TU68461 | lncRNA | downstream | 976470 | 26650482 ~ 26660346 (+) | True | G54777 |
| TU68501 | lncRNA | downstream | 1113812 | 26787824 ~ 26792401 (+) | False | G54806 |
| AMCG00009111 | mRNA | upstream | 27665 | 25623797 ~ 25639855 (+) | True | AMCG00009111 |
| AMCG00009108 | mRNA | upstream | 79905 | 25584882 ~ 25587615 (+) | True | AMCG00009108 |
| AMCG00009107 | mRNA | upstream | 92956 | 25571328 ~ 25574564 (+) | True | AMCG00009107 |
| AMCG00009104 | mRNA | upstream | 174121 | 25489711 ~ 25493399 (+) | False | AMCG00009104 |
| AMCG00009096 | mRNA | upstream | 509969 | 25151798 ~ 25157551 (+) | True | AMCG00009096 |
| AMCG00009110 | mRNA | downstream | 19474 | 25693486 ~ 25716048 (+) | True | AMCG00009110 |
| AMCG00009117 | mRNA | downstream | 823840 | 26497852 ~ 26509639 (+) | True | AMCG00009117 |
| AMCG00009115 | mRNA | downstream | 847852 | 26521864 ~ 26528491 (+) | True | AMCG00009115 |
| AMCG00009116 | mRNA | downstream | 858436 | 26532448 ~ 26538242 (+) | True | AMCG00009116 |
| AMCG00009123 | mRNA | downstream | 891676 | 26565688 ~ 26575442 (+) | True | AMCG00009123 |
| TU68288 | other | upstream | 79910 | 25584892 ~ 25587610 (+) | False | AMCG00009108 |
| TU68059 | other | upstream | 749657 | 24915029 ~ 24917863 (+) | False | AMCG00009088 |
| TU68049 | other | upstream | 850986 | 24812618 ~ 24816534 (+) | True | AMCG00009085 |
| TU67814 | other | upstream | 1691614 | 23883317 ~ 23975906 (+) | True | G54263 |
| TU67408 | other | upstream | 4373619 | 21292241 ~ 21293901 (+) | True | G53917 |
| TU68775 | other | downstream | 1939571 | 27613583 ~ 27617378 (+) | False | AMCG00009164 |
| TU69158 | other | downstream | 3092442 | 28766454 ~ 28777621 (+) | False | AMCG00009204 |
| TU69199 | other | downstream | 3254880 | 28928892 ~ 29011768 (+) | True | AMCG00009207 |
| TU69266 | other | downstream | 3429628 | 29103640 ~ 29106908 (+) | True | AMCG00009208 |
| TU69269 | other | downstream | 3429628 | 29103640 ~ 29106908 (+) | False | AMCG00009208 |
