RNA id: AMCG00009121



Basic Information


Item Value
RNA id AMCG00009121
length 306
RNA type mRNA
GC content 0.50
exon number 5
gene id AMCG00009121
representative False

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 26522633 ~ 26532410 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atgtcaaCGGACGCCATCGTCGCAATGCATGAAGACGAAGCGCTGAAGATGCGGAAGTGTGATGCCTGTGCGGAACCTCTCCAAGATTTCGGAGGAAGTTGTCGGTTGATGTCCGATATGTATGGAGGAAAGGACCTGATGTTCAAAGACTCCACAAAGAAGCTGATCCGCATTCCTGAGATCAGCGACTCCTTCCTGTACCTTGGAGCAGAAAACATGAAGATCGTGCGATCACTGCAGAAGGCGATAGAACTGCAGGAGCTGGCGGCCAAGCTTCACAAGCTGTGCCTTATTGTAAACAAATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU68375 lncRNA downstream 114769 26407583 ~ 26407864 (-) True G54706
TU68366 lncRNA downstream 271776 26250546 ~ 26250857 (-) True G54697
TU68350 lncRNA downstream 431848 26090379 ~ 26090785 (-) True G54682
TU68271 lncRNA downstream 991068 25529829 ~ 25531565 (-) False AMCG00009105
TU68269 lncRNA downstream 998608 25522121 ~ 25524025 (-) True G54613
TU68478 lncRNA upstream 94396 26626806 ~ 26649993 (-) True G54792
TU68489 lncRNA upstream 145840 26678250 ~ 26678588 (-) True G54797
TU68544 lncRNA upstream 316803 26849213 ~ 26852408 (-) True G54841
TU68593 lncRNA upstream 445697 26978107 ~ 26979245 (-) True G54886
TU68620 lncRNA upstream 494129 27026539 ~ 27033024 (-) True G54911
AMCG00009119 mRNA downstream 2499 26514126 ~ 26520134 (-) True AMCG00009119
AMCG00009120 mRNA downstream 28360 26490877 ~ 26494273 (-) True AMCG00009120
AMCG00009118 mRNA downstream 38932 26474679 ~ 26483701 (-) True AMCG00009118
AMCG00009114 mRNA downstream 461977 26059541 ~ 26060656 (-) True AMCG00009114
AMCG00009113 mRNA downstream 572631 25942125 ~ 25950002 (-) True AMCG00009113
AMCG00009124 mRNA upstream 83519 26615929 ~ 26624943 (-) True AMCG00009124
AMCG00009125 mRNA upstream 98202 26630612 ~ 26635364 (-) True AMCG00009125
AMCG00009126 mRNA upstream 122755 26655165 ~ 26673239 (-) True AMCG00009126
AMCG00009127 mRNA upstream 242139 26774549 ~ 26777467 (-) True AMCG00009127
AMCG00009131 mRNA upstream 254608 26787018 ~ 26788465 (-) True AMCG00009131
TU68195 other downstream 1346255 25173677 ~ 25176378 (-) True AMCG00009100
TU68185 other downstream 1366295 25153266 ~ 25156338 (-) True G54544
TU67499 other downstream 4339068 22183088 ~ 22183565 (-) True G54003
TU67292 other downstream 6258548 20200747 ~ 20264085 (-) True G53809
TU68523 other upstream 261131 26793541 ~ 26796654 (-) True G54821
TU68783 other upstream 1081188 27613598 ~ 27618089 (-) True AMCG00009165
TU69243 other upstream 2525874 29058284 ~ 29063030 (-) False AMCG00009215
TU69394 other upstream 3128550 29660960 ~ 29670337 (-) True AMCG00009229
TU69579 other upstream 3717461 30249871 ~ 30254483 (-) True AMCG00009241

Expression Profile