RNA id: AMCG00009138


Basic Information

Item Value
RNA id AMCG00009138
length 267
RNA type mRNA
GC content 0.55
exon number 2
gene id AMCG00009138
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 26801474 ~ 26801849 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AAAGCCCCGCATTCTCACGGGCCAGCTACACCGGACACAACAGGGGCTCAGCTTGAGCGGTGCCAGAAGGCTGTCAATCTGGCCTCAGTTCTGGAGGGCTCTGCTGCGCAGACACTAGAGCAAGCAAGAGGAGAGAGACTGGGAGTCCTAGCGGCAGATATTGCTTACTTAGCCCAAAGAGTGTATAAAGATCTCCCTATAGAAGCCATCCAGTGCCAGGCGTTGAATGCCTTTCTACGGAGCTTGCGTCCCATACAGTTACGGCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU68507 lncRNA upstream 4706 26793537 ~ 26796768 (+) True AMCG00009129
TU68501 lncRNA upstream 9073 26787824 ~ 26792401 (+) False G54806
TU68505 lncRNA upstream 9073 26791573 ~ 26792401 (+) False G54806
TU68461 lncRNA upstream 141128 26650482 ~ 26660346 (+) True G54777
TU68395 lncRNA upstream 261274 26538319 ~ 26540200 (+) True G54724
TU68500 lncRNA downstream 8802 26810651 ~ 26814492 (+) True G54806
TU68503 lncRNA downstream 8802 26810651 ~ 26811251 (+) False G54806
TU68512 lncRNA downstream 20447 26822296 ~ 26824929 (+) True G54812
TU68536 lncRNA downstream 47373 26849222 ~ 26851003 (+) True G54833
TU68587 lncRNA downstream 180994 26982843 ~ 26984157 (+) True G54880
AMCG00009129 mRNA upstream 4707 26794190 ~ 26796767 (+) False AMCG00009129
AMCG00009128 mRNA upstream 15684 26782537 ~ 26785790 (+) True AMCG00009128
AMCG00009122 mRNA upstream 158003 26636487 ~ 26643471 (+) True AMCG00009122
AMCG00009123 mRNA upstream 226032 26565688 ~ 26575442 (+) True AMCG00009123
AMCG00009116 mRNA upstream 263232 26532448 ~ 26538242 (+) True AMCG00009116
AMCG00009130 mRNA downstream 28350 26830199 ~ 26836417 (+) True AMCG00009130
AMCG00009139 mRNA downstream 96760 26898609 ~ 26903272 (+) True AMCG00009139
AMCG00009140 mRNA downstream 168036 26969885 ~ 26981851 (+) True AMCG00009140
AMCG00009145 mRNA downstream 193109 26994958 ~ 27032957 (+) True AMCG00009145
AMCG00009146 mRNA downstream 235480 27037329 ~ 27058960 (+) True AMCG00009146
TU68288 other upstream 1213864 25584892 ~ 25587610 (+) False AMCG00009108
TU68059 other upstream 1883611 24915029 ~ 24917863 (+) False AMCG00009088
TU68049 other upstream 1984940 24812618 ~ 24816534 (+) True AMCG00009085
TU67814 other upstream 2825568 23883317 ~ 23975906 (+) True G54263
TU67408 other upstream 5507573 21292241 ~ 21293901 (+) True G53917
TU68775 other downstream 811734 27613583 ~ 27617378 (+) False AMCG00009164
TU69158 other downstream 1964605 28766454 ~ 28777621 (+) False AMCG00009204
TU69199 other downstream 2127043 28928892 ~ 29011768 (+) True AMCG00009207
TU69266 other downstream 2301791 29103640 ~ 29106908 (+) True AMCG00009208
TU69269 other downstream 2301791 29103640 ~ 29106908 (+) False AMCG00009208