RNA id: AMCG00009215


Basic Information

Item Value
RNA id AMCG00009215
length 1014
RNA type mRNA
GC content 0.55
exon number 1
gene id AMCG00009215
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 29057941 ~ 29063030 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAATTCTTCAGTAGAATTCGCTTCCTTGCTCTCCAACTATTCATCCGAGAATTGCAGCGCTGAGTCGGTGGTGGAGAATGTCCTCTTTGGTGGATTCTATATCGTCGTGTTCCTTCTGGCCCTGAATGGGAATGTGCTTGCTCTGTGGATCTTCTCTCGCCAGCATGGCACCTCTTCCCCTGCCAATGTCTTCCTGTTGCACCTGGCAGTGGCTGACCTCTCCTATGTGGCGATCTTGCCTCTGCGGGCCACATACCACCTGACGGGGGGACACTGGCCTTTCGGCGAAGTGCCTTGCCGTGTGATTGGCTTCCTCTTCTATGTCAACATGTATGCCAGCATCTACTTTCTAGCATGCGTAGCCGTGGATAGGTATCTGGCGGTGGTGCATGCTGTGCGATCCCTGAAAATCAGACGTGCCCGCTACGCCCATGCCGTCAGTTTCGCCCTCTGGGTCCTGGTCACCATATCCATGGCACCCCTGCTTGCCACTCAGCAGACTATCCAAGGAGACAACGTCACCATTTGCCTGCAGCTATACCGGGAGAAAACGTCCCAGCTAGCCCTCGTCTCCCTGGCTGTTGCCTTCTTACCCCCTTTCCTTGCAACGCTGGTCTGCTACCTACTGATCTTTCACAGTCTCCGCAAGGGAACTAGGCTGGAGCCTGGGCTGAAGAGTAAAGCTCTTTGCACCATCAGCTTGGTGTTGCTCATCTACTTGATCTGCTTTTTACCTTACCACGCCAGCCGAGCCATCTACATCCTGGTGCACAGCATCCCGGGACTGTCCTGCCAGACGAAGAGAGCCCTAACGCTGGGCAACCGCCTCACCTCTTCCCTCACCTGCCTGAATGGAGCTCTAGACCCGCTGGTGTATTTGTTTGGTGCAGAGAAGTTTCGAGAGAGGCTTATGCAGGTGTTCTGTGGGAAGAGAGGAGGGTACTCCGGAGCTGCCAGTGGCGAGGGGAAAACAACCCACGAAAGCTCACTGAGCGCCAAGTCTGAGTTCTGA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K08404 GPR17; G protein-coupled receptor 17

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU69242 lncRNA downstream 700 29055713 ~ 29057241 (-) True G55404
TU69188 lncRNA downstream 164058 28843473 ~ 28893883 (-) True G55359
TU69150 lncRNA downstream 302308 28755298 ~ 28755633 (-) True G55333
TU69139 lncRNA downstream 329971 28721540 ~ 28727970 (-) True G55326
TU69061 lncRNA downstream 552145 28488651 ~ 28505796 (-) True G55268
TU69343 lncRNA upstream 399661 29458615 ~ 29458827 (-) True G55488
TU69429 lncRNA upstream 700573 29759527 ~ 29762165 (-) True G55551
TU69510 lncRNA upstream 916675 29975629 ~ 29976269 (-) True G55610
TU69515 lncRNA upstream 930945 29989899 ~ 29990810 (-) False AMCG00009235
TU69564 lncRNA upstream 1177205 30236159 ~ 30236395 (-) True G55648
AMCG00009212 mRNA downstream 5417 29029309 ~ 29052524 (-) True AMCG00009212
AMCG00009209 mRNA downstream 34013 29020638 ~ 29023928 (-) True AMCG00009209
AMCG00009196 mRNA downstream 408868 28643287 ~ 28649073 (-) True AMCG00009196
AMCG00009195 mRNA downstream 417330 28632355 ~ 28640611 (-) True AMCG00009195
AMCG00009194 mRNA downstream 426990 28627412 ~ 28630951 (-) True AMCG00009194
AMCG00009213 mRNA upstream 4809 29063763 ~ 29089403 (-) True AMCG00009213
AMCG00009211 mRNA upstream 31101 29090055 ~ 29103281 (-) True AMCG00009211
AMCG00009210 mRNA upstream 61461 29120415 ~ 29135151 (-) True AMCG00009210
AMCG00009216 mRNA upstream 104319 29163273 ~ 29171791 (-) True AMCG00009216
AMCG00009217 mRNA upstream 128582 29187536 ~ 29197143 (-) True AMCG00009217
TU68783 other downstream 1439852 27613598 ~ 27618089 (-) True AMCG00009165
TU68523 other downstream 2261287 26793541 ~ 26796654 (-) True G54821
TU68195 other downstream 3881563 25173677 ~ 25176378 (-) True AMCG00009100
TU68185 other downstream 3901603 25153266 ~ 25156338 (-) True G54544
TU67499 other downstream 6874376 22183088 ~ 22183565 (-) True G54003
TU69394 other upstream 602006 29660960 ~ 29670337 (-) True AMCG00009229
TU69579 other upstream 1190917 30249871 ~ 30254483 (-) True AMCG00009241
TU69693 other upstream 1543625 30602579 ~ 30657612 (-) False AMCG00009265
TU69850 other upstream 1875610 30934564 ~ 30937251 (-) True G55878
TU69860 other upstream 1885413 30944367 ~ 30947211 (-) True G55881

Expression Profile