RNA id: AMCG00009221


Basic Information

Item Value
RNA id AMCG00009221
length 210
RNA type mRNA
GC content 0.52
exon number 2
gene id AMCG00009221
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 29308856 ~ 29309773 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTGGAATCAACCAAAGAATGACGGTGAAGAATATGGGCACGTGACCGCAAGGATGGAAACCACTCCCGGCTTTGGTATCCCCAGCATCTCTGTGTCCCAGCAGCAGGCGCCAAAGAAATTTGCGCCTGTTGTTGCCCCCAAGCCAAAGTTCAATCCCTATAAGCAGCTAGGAGAAGCGGCACACTCCGGTGCTGGAGAGTTCACATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU69312 lncRNA upstream 120901 29186694 ~ 29187955 (+) True G55463
TU69310 lncRNA upstream 123672 29184921 ~ 29185184 (+) True G55461
TU69229 lncRNA upstream 277378 29029318 ~ 29031478 (+) True G55394
TU69185 lncRNA upstream 410163 28897976 ~ 28898693 (+) True G55357
TU69110 lncRNA upstream 675524 28632355 ~ 28633332 (+) True G55308
TU69342 lncRNA downstream 148648 29458421 ~ 29458743 (+) True G55487
TU69374 lncRNA downstream 331716 29641489 ~ 29641936 (+) True G55512
TU69445 lncRNA downstream 548522 29858295 ~ 29932152 (+) False G55564
TU69444 lncRNA downstream 620002 29929775 ~ 29932152 (+) True G55564
TU69469 lncRNA downstream 665830 29975603 ~ 29976267 (+) True G55586
AMCG00009220 mRNA upstream 134125 29171323 ~ 29174731 (+) False AMCG00009220
AMCG00009208 mRNA upstream 200629 29103608 ~ 29108227 (+) False AMCG00009208
AMCG00009214 mRNA upstream 206779 29075081 ~ 29102077 (+) True AMCG00009214
AMCG00009202 mRNA upstream 288964 29014392 ~ 29019892 (+) True AMCG00009202
AMCG00009207 mRNA upstream 324536 28982329 ~ 28984320 (+) False AMCG00009207
AMCG00009218 mRNA downstream 56865 29366638 ~ 29402226 (+) True AMCG00009218
AMCG00009219 mRNA downstream 106663 29416436 ~ 29419290 (+) True AMCG00009219
AMCG00009225 mRNA downstream 151712 29461485 ~ 29470524 (+) True AMCG00009225
AMCG00009224 mRNA downstream 174770 29484543 ~ 29487155 (+) True AMCG00009224
AMCG00009223 mRNA downstream 219106 29528879 ~ 29529494 (+) True AMCG00009223
TU69299 other upstream 134156 29173139 ~ 29174700 (+) True AMCG00009220
TU69266 other upstream 201948 29103640 ~ 29106908 (+) True AMCG00009208
TU69269 other upstream 201948 29103640 ~ 29106908 (+) False AMCG00009208
TU69199 other upstream 297088 28928892 ~ 29011768 (+) True AMCG00009207
TU69158 other upstream 531235 28766454 ~ 28777621 (+) False AMCG00009204
TU69455 other downstream 598138 29907911 ~ 29911564 (+) True G55573
TU69474 other downstream 685353 29995126 ~ 29995438 (+) True G55591
TU70069 other downstream 2851987 32161760 ~ 32165365 (+) True G56060
TU70453 other downstream 4691023 34000796 ~ 34031445 (+) True G56368
TU70456 other downstream 4705897 34015670 ~ 34018815 (+) True G56369

Expression Profile