RNA id: AMCG00009260


Basic Information

Item Value
RNA id AMCG00009260
length 1717
RNA type mRNA
GC content 0.41
exon number 2
gene id AMCG00009260
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 30865491 ~ 30877032 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ctCCACCATGAGCAATTGTTCCTTTAAAGAAGTCAATGACTTTATGAGCTCAATATATTTAGTCATCTATATTCCTACATTTGTTGTGGGCCTTATCCTAAACTCCCTGGCACTGGTTGTCTTCTGTGTCATGCTGAAGAAATGGACAGAATCGACCATTTACATGACTAATCTTGCACTAATGGACCTCCTGCTTCTGCTACCTCTGCCCTTTAAAATGCATGCGTCAATGAATAAATGGTCCAGTGACAAAAAAACTGCATGCTCTTTCCTGGAGAGCCTTTACTTTGTGAGTATGTATGGGAGCATATTCACAATCATGTGCATTAGTGTTGACAGGTACATAGGAATCAAACACCCTTTCAAGGCCAAAGTGTTGAGATCACCAAAAAAGGCGCTGATTGTGTGCATTGTAATCTGGGTTGCTGTGTGGGCGGGAACTGCCCCCGTTTATGGCTTCCACTCTGAACAGGAGCCCGGTGCTGatgttttcagatgttttcatGGATTTTCAAAGGATTCCTGGAGCATCCCAGTGATCTTGAATCTGGAGATAATCGGGTTTCTCATCCCAATGCTGGTAATGGTTTTCTGCACTATACAGATCATCATAACCCTAAAAAAGTCTGAACAGAACAGGGAAAACAGCCAGGCTGGGATCAGAATCATATATGCCAACCTGTTTGTGTTCCTGGTATCTTTTACGCCAAGCCACCTGGggatttttttacagtttttggtTCGGAGAGACTTCATTGAAGACTGTTCTTCAAAACTCaatattagtttatttgttCAAGTAACAATGTGCCTGGCTAATGTCACCTGCTGTCTGGATGCTATTTGTTATTACTTCATTACAAAGGAAATTCGATCAACAAGTGGCTCTTTCAGGAGATCCCGGAGCCACAGGATTAATAGTACAACAACAGAAATGTACGCATATAGAAACAGCTGGAAACTGGGAGACGGACTGTGTTCTTTCCTGGAGAGTCTTCTGTATGTTAACATGTACGGCAGCATACTGATCATTGCATGCATTTCTGTGGACCGCTACATTGCTTTAAGACATCCCTTTTTCGCCAAAACTATTCGCTCACCGCGGAAAGCCACAGTTGCCTGCATTGCAATATGGATAATCATTTTTGGAGCCAGTGGGCCAGTTTACAAGTTACATGGCAAAAATACCActgattgttttaaaactttttcaaatgaaacctGGAATAAAGTCCACATCGTGGTTGGGATGGAGACTGTGTTCATCGCCAGTGCCCTCGTCCTCATCTTCTGTTCCATCCATGTGATCAAGATCTTAATTACAATGCAAAAGAGAAACACCGGAGACCAGCAGCTCCTGAATAACAAATCGATTAAAATCATCCTCACCAACCTCATATCATTCTTGGTCTGTTTCATACCTTATCACATTGCAGTACCtatgtattttatgaaaaagaaacaaaacatgaattctgACCCGTTAATTGATAGTTTGCGGAATTTTATTCACATCTCCATTTGTCTGACAAGCATTAACTGCTTATTTGATGGGATTTgctattattttatcattaaagaGATCACAATATCTGCTAGACAGACAGCAACGGAAACAACTGAGCTAACGGATGTTTTCAGGAAGACAAGCAAAAGGACCTGTACTAATCTAAGAACTCAACTCAGTAAGGACGACAACCAACAGTTAAGTTTAACT

Function

GO: NA

KEGG:

id description
K08413 GPR55; G protein-coupled receptor 55

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU69680 lncRNA upstream 263459 30599932 ~ 30602032 (+) True G55745
TU69678 lncRNA upstream 265257 30599474 ~ 30600234 (+) False G55745
TU69639 lncRNA upstream 367887 30495543 ~ 30497604 (+) True G55707
TU69569 lncRNA upstream 622760 30239333 ~ 30242731 (+) False G55649
TU69568 lncRNA upstream 624999 30236924 ~ 30240492 (+) False G55649
TU69754 lncRNA downstream 70334 30947366 ~ 30950209 (+) True G55800
TU69761 lncRNA downstream 278486 31155518 ~ 31163151 (+) True G55807
TU69914 lncRNA downstream 665589 31542621 ~ 31547232 (+) True G55926
TU69917 lncRNA downstream 671499 31548531 ~ 31552162 (+) True G55929
TU70028 lncRNA downstream 1176755 32053787 ~ 32057482 (+) True G56021
AMCG00009264 mRNA upstream 19003 30838893 ~ 30846488 (+) True AMCG00009264
AMCG00009256 mRNA upstream 91001 30642206 ~ 30774490 (+) True AMCG00009256
AMCG00009257 mRNA upstream 223350 30616894 ~ 30642141 (+) True AMCG00009257
AMCG00009252 mRNA upstream 307199 30552556 ~ 30558292 (+) True AMCG00009252
AMCG00009251 mRNA upstream 334999 30517226 ~ 30530492 (+) True AMCG00009251
AMCG00009259 mRNA downstream 51142 30928174 ~ 30935918 (+) True AMCG00009259
AMCG00009258 mRNA downstream 67339 30944371 ~ 30947285 (+) True AMCG00009258
AMCG00009273 mRNA downstream 254118 31131150 ~ 31136570 (+) True AMCG00009273
AMCG00009277 mRNA downstream 478085 31355117 ~ 31370777 (+) True AMCG00009277
AMCG00009278 mRNA downstream 517847 31394879 ~ 31412124 (+) True AMCG00009278
TU69474 other upstream 870053 29995126 ~ 29995438 (+) True G55591
TU69455 other upstream 953927 29907911 ~ 29911564 (+) True G55573
TU69299 other upstream 1690791 29173139 ~ 29174700 (+) True AMCG00009220
TU69266 other upstream 1758583 29103640 ~ 29106908 (+) True AMCG00009208
TU70069 other downstream 1284728 32161760 ~ 32165365 (+) True G56060
TU70453 other downstream 3123764 34000796 ~ 34031445 (+) True G56368
TU70456 other downstream 3138638 34015670 ~ 34018815 (+) True G56369
TU70668 other downstream 4511882 35388914 ~ 35389327 (+) True G56536
TU70945 other downstream 6483069 37360101 ~ 37367671 (+) True AMCG00009405

Expression Profile