RNA id: AMCG00009266


Basic Information

Item Value
RNA id AMCG00009266
length 744
RNA type mRNA
GC content 0.45
exon number 3
gene id AMCG00009266
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 30693699 ~ 30696595 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCTGAGAGGATTGCCAATCTGACTGCCAACAACATCAGCACAACATCTATAGTCCTTACATGGAGTGCACCATTTGGAAATGCAGGGGGTTACAAAGTTGAAGCCACTGGACCTACTTTTACAAACTTCACAGTGAACACATTATCAGCTAAAGTATCTGGACTTGTACCTGGAAGCAATTATACACTGAGTGTTATTGCTGTGGCTGCAGACAATGTTACTGAAGGGGCACCAGTGACAACAACAGTATCTACAACCACCTCCATTTCCACAACATCAATCTTCCTTAGCTGGAGTGCACCTATTGGAAATGTGTCCAGCTACAGAGTGGAGACAAGGGGAATATCTGGATACAATATGACTGTGAAGACTTTGTTCGCTAATATCTCTGGACTTGAGCCTGGAAGCAACTACACATTGCAGGTTACTGCAGTGGCAGCAGACACTGTGACTGAAGGGGCTGCTGTAGCAATCAGCAATTTTACTAAGCCTGGTTCTGTGAACAATCTCACTATGATAAAGGTCACCACAACGTCCATAACCCTTAGCTGGAGTGCACCATCTGGAAATGCAGGAGGGTACAGAGTTGAAGTCAATGGTATGACTGTTAAGAGTCTTGGAGTGAACACATTCTCAACTGAAATAACTGGACTCGTACCTGGAAGCAATTATACTCTGGGGGTTATTGCTGTGGCTGCAGACAGCATTACTGAAGGAGCTACAGTGACAGTCACAGTACTTTTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU69697 lncRNA downstream 38678 30652912 ~ 30655021 (-) True G55760
TU69654 lncRNA downstream 201719 30491238 ~ 30491980 (-) True G55722
TU69634 lncRNA downstream 210326 30480779 ~ 30483373 (-) True G55703
TU69564 lncRNA downstream 457304 30236159 ~ 30236395 (-) True G55648
TU69515 lncRNA downstream 702889 29989899 ~ 29990810 (-) False AMCG00009235
TU69824 lncRNA upstream 112981 30809576 ~ 30816091 (-) True G55861
TU69967 lncRNA upstream 1218573 31915168 ~ 31915373 (-) True G55975
TU69990 lncRNA upstream 1253827 31950422 ~ 31950673 (-) True G55991
TU70018 lncRNA upstream 1301482 31998077 ~ 32031970 (-) True G56012
TU70199 lncRNA upstream 2103940 32800535 ~ 32800895 (-) True G56163
AMCG00009268 mRNA downstream 41571 30651647 ~ 30652128 (-) True AMCG00009268
AMCG00009265 mRNA downstream 90854 30599474 ~ 30602845 (-) True AMCG00009265
AMCG00009262 mRNA downstream 126005 30561748 ~ 30567694 (-) True AMCG00009262
AMCG00009253 mRNA downstream 145878 30544153 ~ 30547821 (-) True AMCG00009253
AMCG00009254 mRNA downstream 151404 30536850 ~ 30542295 (-) True AMCG00009254
AMCG00009267 mRNA upstream 105150 30801745 ~ 30803630 (-) True AMCG00009267
AMCG00009261 mRNA upstream 199380 30895975 ~ 30905764 (-) True AMCG00009261
AMCG00009263 mRNA upstream 210273 30906868 ~ 30917622 (-) True AMCG00009263
AMCG00009270 mRNA upstream 250703 30947298 ~ 30970858 (-) True AMCG00009270
AMCG00009269 mRNA upstream 276527 30973122 ~ 30981907 (-) False AMCG00009269
TU69693 other downstream 36087 30602579 ~ 30657612 (-) False AMCG00009265
TU69579 other downstream 439216 30249871 ~ 30254483 (-) True AMCG00009241
TU69394 other downstream 1023362 29660960 ~ 29670337 (-) True AMCG00009229
TU69243 other downstream 1630669 29058284 ~ 29063030 (-) False AMCG00009215
TU68783 other downstream 3075610 27613598 ~ 27618089 (-) True AMCG00009165
TU69850 other upstream 237969 30934564 ~ 30937251 (-) True G55878
TU69860 other upstream 247772 30944367 ~ 30947211 (-) True G55881
TU69861 other upstream 276358 30972953 ~ 30985995 (-) True AMCG00009269
TU69876 other upstream 468416 31165011 ~ 31184966 (-) True AMCG00009275
TU70548 other upstream 3530679 34227274 ~ 34229389 (-) False AMCG00009342

Expression Profile