Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00009277 |
| length | 957 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 5 |
| gene id | AMCG00009277 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 31355117 ~ 31370777 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU69761 | lncRNA | upstream | 191966 | 31155518 ~ 31163151 (+) | True | G55807 |
| TU69754 | lncRNA | upstream | 404908 | 30947366 ~ 30950209 (+) | True | G55800 |
| TU69680 | lncRNA | upstream | 753085 | 30599932 ~ 30602032 (+) | True | G55745 |
| TU69678 | lncRNA | upstream | 754883 | 30599474 ~ 30600234 (+) | False | G55745 |
| TU69639 | lncRNA | upstream | 857513 | 30495543 ~ 30497604 (+) | True | G55707 |
| TU69914 | lncRNA | downstream | 171844 | 31542621 ~ 31547232 (+) | True | G55926 |
| TU69917 | lncRNA | downstream | 177754 | 31548531 ~ 31552162 (+) | True | G55929 |
| TU70028 | lncRNA | downstream | 683010 | 32053787 ~ 32057482 (+) | True | G56021 |
| TU70072 | lncRNA | downstream | 796088 | 32166865 ~ 32168048 (+) | True | G56062 |
| TU70077 | lncRNA | downstream | 803530 | 32174307 ~ 32179259 (+) | True | G56064 |
| AMCG00009273 | mRNA | upstream | 218547 | 31131150 ~ 31136570 (+) | True | AMCG00009273 |
| AMCG00009258 | mRNA | upstream | 407832 | 30944371 ~ 30947285 (+) | True | AMCG00009258 |
| AMCG00009259 | mRNA | upstream | 419199 | 30928174 ~ 30935918 (+) | True | AMCG00009259 |
| AMCG00009260 | mRNA | upstream | 478085 | 30865491 ~ 30877032 (+) | True | AMCG00009260 |
| AMCG00009264 | mRNA | upstream | 508629 | 30838893 ~ 30846488 (+) | True | AMCG00009264 |
| AMCG00009278 | mRNA | downstream | 24102 | 31394879 ~ 31412124 (+) | True | AMCG00009278 |
| AMCG00009276 | mRNA | downstream | 49063 | 31419840 ~ 31424011 (+) | True | AMCG00009276 |
| AMCG00009281 | mRNA | downstream | 222271 | 31593048 ~ 31604365 (+) | True | AMCG00009281 |
| AMCG00009283 | mRNA | downstream | 549910 | 31920687 ~ 31940691 (+) | True | AMCG00009283 |
| AMCG00009284 | mRNA | downstream | 583894 | 31954671 ~ 31959897 (+) | True | AMCG00009284 |
| TU69474 | other | upstream | 1359679 | 29995126 ~ 29995438 (+) | True | G55591 |
| TU69455 | other | upstream | 1443553 | 29907911 ~ 29911564 (+) | True | G55573 |
| TU69299 | other | upstream | 2180417 | 29173139 ~ 29174700 (+) | True | AMCG00009220 |
| TU69266 | other | upstream | 2248209 | 29103640 ~ 29106908 (+) | True | AMCG00009208 |
| TU70069 | other | downstream | 790983 | 32161760 ~ 32165365 (+) | True | G56060 |
| TU70453 | other | downstream | 2630019 | 34000796 ~ 34031445 (+) | True | G56368 |
| TU70456 | other | downstream | 2644893 | 34015670 ~ 34018815 (+) | True | G56369 |
| TU70668 | other | downstream | 4018137 | 35388914 ~ 35389327 (+) | True | G56536 |
| TU70945 | other | downstream | 5989324 | 37360101 ~ 37367671 (+) | True | AMCG00009405 |
