RNA id: AMCG00009292



Basic Information


Item Value
RNA id AMCG00009292
length 525
RNA type mRNA
GC content 0.63
exon number 1
gene id AMCG00009292
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 32008564 ~ 32009088 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCTAATCATGGAAGCAGAAAACACCACCGCAGCCGACCTGGCGGGGCTCAGCGCCTCCTCCAAGAGCGTCGACGCCCGGGAAGGTGGCAACGAGTACCTGTACATCCTAATCGTCATGTCCTTCTACGGGATCTTCCTGCTGGGGATTATGCTTGGCTACGTCCGATCAAAGAGGAGGGAGAAGAAATCCAACGCCTTGACGCACCTGCTCTACGAGGAGGAGCGGCGGGAGTGGGGGGACATGCGGAAGAAGCACAGCCTGCCGCTGCCCTCCTGTTCAGGACTGGGAGCTGTCCAGGTGTCGCTGCCCTTCAGCGGCCTGGCGGACGGGCGGCTGCCGGCGCCCTTCTCCTGCGCCATGTGCACCATGGAGCAAAGCAGCGTCAGCTCCCTGTGCTCGTCCGCAGACATCCACTGCGCCatcgaggaggaggaggcggacgCCGGGGAGCCCTGCGAGGCGCTCAAAGCCAAGTCGGACAACAGAGAGCAGTGCGTGGCCATGCTCCATGAAGCATCTTGA

Function


GO: NA

KEGG:

id description
K04898 KCNE4; potassium voltage-gated channel Isk-related subfamily E member 4

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU69917 lncRNA upstream 456402 31548531 ~ 31552162 (+) True G55929
TU69914 lncRNA upstream 461332 31542621 ~ 31547232 (+) True G55926
TU69761 lncRNA upstream 845413 31155518 ~ 31163151 (+) True G55807
TU69754 lncRNA upstream 1058355 30947366 ~ 30950209 (+) True G55800
TU69680 lncRNA upstream 1406532 30599932 ~ 30602032 (+) True G55745
TU70028 lncRNA downstream 44699 32053787 ~ 32057482 (+) True G56021
TU70072 lncRNA downstream 157777 32166865 ~ 32168048 (+) True G56062
TU70077 lncRNA downstream 165219 32174307 ~ 32179259 (+) True G56064
TU70149 lncRNA downstream 538919 32548007 ~ 32553904 (+) True G56120
TU70257 lncRNA downstream 939049 32948137 ~ 32950966 (+) False G56211
AMCG00009288 mRNA upstream 9478 31968819 ~ 31999086 (+) True AMCG00009288
AMCG00009284 mRNA upstream 48667 31954671 ~ 31959897 (+) True AMCG00009284
AMCG00009283 mRNA upstream 67873 31920687 ~ 31940691 (+) True AMCG00009283
AMCG00009281 mRNA upstream 404199 31593048 ~ 31604365 (+) True AMCG00009281
AMCG00009276 mRNA upstream 584553 31419840 ~ 31424011 (+) True AMCG00009276
AMCG00009291 mRNA downstream 41416 32050504 ~ 32052393 (+) True AMCG00009291
AMCG00009289 mRNA downstream 51725 32060813 ~ 32066699 (+) True AMCG00009289
AMCG00009293 mRNA downstream 106390 32115478 ~ 32119196 (+) True AMCG00009293
AMCG00009298 mRNA downstream 174037 32183125 ~ 32196353 (+) True AMCG00009298
AMCG00009304 mRNA downstream 512430 32521518 ~ 32533407 (+) True AMCG00009304
TU69474 other upstream 2013126 29995126 ~ 29995438 (+) True G55591
TU69455 other upstream 2097000 29907911 ~ 29911564 (+) True G55573
TU69299 other upstream 2833864 29173139 ~ 29174700 (+) True AMCG00009220
TU69266 other upstream 2901656 29103640 ~ 29106908 (+) True AMCG00009208
TU70069 other downstream 152672 32161760 ~ 32165365 (+) True G56060
TU70453 other downstream 1991708 34000796 ~ 34031445 (+) True G56368
TU70456 other downstream 2006582 34015670 ~ 34018815 (+) True G56369
TU70668 other downstream 3379826 35388914 ~ 35389327 (+) True G56536
TU70945 other downstream 5351013 37360101 ~ 37367671 (+) True AMCG00009405

Expression Profile