RNA id: AMCG00009311



Basic Information


Item Value
RNA id AMCG00009311
length 597
RNA type mRNA
GC content 0.51
exon number 1
gene id AMCG00009311
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 32759533 ~ 32760129 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGATTTGGGAAGCGATGCCTGCAGTCGTTCCAGTTCTGAATCCAACTCGAACAAAGTGACCCCCTGTTCGGAATATAAATCCTCTCCAAGCCTGGACTTGGCCACATTAGAAGACTATGAAGAAGATGAGGACTATCAGGAATACAAGAAAAAGGTGATCGAGGAGTGGGAGAGTGAATATGGGGACTATGCGGAGAACGAAGGCTATGCCAAGACCGTGAACAGCAGGAGTTTAGCGGAGGAATTCCAAGATGTCAAAAGCCCCACACCTCTTCCTCCCAGTGACCCTGCTCCCGAAATACTTAAGCAAAATGGCAACATTGTTCCAAGTCACTCAGGGGCTAAATCAAATAAGACCTTTCAGAAGCCCGGCCAGGCACTGGTTATAACGGGAGGGGGTGTGGGCTCCAGGAGGGTGCCGGAGAGCTCAGGGACTGAAGCTGCAGAAGAGCCGCAATTGCCCACCATGGATTGGGAAGCCCTGGAGAAACATCTGGCTGGCCTGCAGTTTCGGGAACAGGAGGTGCGCAACCAAAACCAGAGCCAGGGAAAAACCAACTACACCTCAGTGAGTGCTCTCATTTCTATGCCTTAA

Function


GO:

id name namespace
GO:0006814 sodium ion transport biological_process

KEGG:

id description
ko04911 Insulin secretion

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU70149 lncRNA upstream 205629 32548007 ~ 32553904 (+) True G56120
TU70077 lncRNA upstream 580274 32174307 ~ 32179259 (+) True G56064
TU70072 lncRNA upstream 591485 32166865 ~ 32168048 (+) True G56062
TU70028 lncRNA upstream 702051 32053787 ~ 32057482 (+) True G56021
TU69917 lncRNA upstream 1207371 31548531 ~ 31552162 (+) True G55929
TU70257 lncRNA downstream 188008 32948137 ~ 32950966 (+) False G56211
TU70258 lncRNA downstream 188008 32948137 ~ 32950966 (+) True G56211
TU70326 lncRNA downstream 346241 33106370 ~ 33106621 (+) True G56261
TU70327 lncRNA downstream 349610 33109739 ~ 33110019 (+) True G56262
TU70333 lncRNA downstream 521408 33281537 ~ 33281764 (+) True G56268
AMCG00009308 mRNA upstream 7068 32572939 ~ 32752465 (+) True AMCG00009308
AMCG00009306 mRNA upstream 194596 32553662 ~ 32564937 (+) True AMCG00009306
AMCG00009305 mRNA upstream 211038 32533877 ~ 32548495 (+) True AMCG00009305
AMCG00009304 mRNA upstream 226126 32521518 ~ 32533407 (+) True AMCG00009304
AMCG00009298 mRNA upstream 563180 32183125 ~ 32196353 (+) True AMCG00009298
AMCG00009309 mRNA downstream 23002 32783131 ~ 32800441 (+) True AMCG00009309
AMCG00009312 mRNA downstream 87421 32847550 ~ 32847873 (+) True AMCG00009312
AMCG00009313 mRNA downstream 147805 32907934 ~ 32923438 (+) True AMCG00009313
AMCG00009318 mRNA downstream 245846 33005975 ~ 33016571 (+) True AMCG00009318
AMCG00009317 mRNA downstream 289875 33050004 ~ 33055488 (+) True AMCG00009317
TU70069 other upstream 594168 32161760 ~ 32165365 (+) True G56060
TU69474 other upstream 2764095 29995126 ~ 29995438 (+) True G55591
TU69455 other upstream 2847969 29907911 ~ 29911564 (+) True G55573
TU69299 other upstream 3584833 29173139 ~ 29174700 (+) True AMCG00009220
TU69269 other upstream 3652625 29103640 ~ 29106908 (+) False AMCG00009208
TU70453 other downstream 1240667 34000796 ~ 34031445 (+) True G56368
TU70456 other downstream 1255541 34015670 ~ 34018815 (+) True G56369
TU70668 other downstream 2628785 35388914 ~ 35389327 (+) True G56536
TU70945 other downstream 4599972 37360101 ~ 37367671 (+) True AMCG00009405
TU71113 other downstream 4850214 37610343 ~ 37616283 (+) False AMCG00009428

Expression Profile