RNA id: AMCG00009328


Basic Information

Item Value
RNA id AMCG00009328
length 483
RNA type mRNA
GC content 0.39
exon number 3
gene id AMCG00009328
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 33944249 ~ 33948166 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GATACATTCTTGGCACTCAAAAGCACTGCAAAAGCAATATCGACTCAAAGGAAAGAACACACATTAAAACTGGCCAGCTCTCTCTGTGTTCAAGAGGGCTTTCTCTTAAGGGTTCAATATCTCCAGGGCAGTAGAGattattttaacatgaatatCAAACGAATGAACTTCCTACATTCAGATGCATCTGCTAAAAGTCTGAAGTCCTTGGTAGATCAAACAAATATGAATGCCATCTACTTCAAAGGACTGCAGGAGAACAGGTTTAATCTAGAACACACATTATTGATGGATCCTACTAAGAAGGATGGTCCTGTAATACAAATTCCAATGATGTACCTGAAGTTAACAACTAATATTGGTTATTTTACAAATGACAACACTAAGATGCAACTGTTGGAGCCGCCGTACAATGGGGATCAGGCGAGTATAATACTGGCCCTCCCTGGAGACAGCAATGCTATTGAACAAGTGGAAAACTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU70330 lncRNA downstream 800127 33143856 ~ 33144122 (-) True G56265
TU70325 lncRNA downstream 847399 33096584 ~ 33096850 (-) True G56260
TU70324 lncRNA downstream 848019 33095997 ~ 33096230 (-) True G56259
TU70321 lncRNA downstream 906010 33032977 ~ 33038239 (-) True G56256
TU70223 lncRNA downstream 1099913 32844095 ~ 32844336 (-) True G56185
TU70493 lncRNA upstream 59437 34007603 ~ 34008987 (-) False AMCG00009332
TU70494 lncRNA upstream 101021 34049187 ~ 34050160 (-) False AMCG00009333
TU70508 lncRNA upstream 175440 34123606 ~ 34124979 (-) True G56401
TU70553 lncRNA upstream 291318 34239484 ~ 34316008 (-) False G56438
TU70554 lncRNA upstream 291318 34239484 ~ 34304911 (-) False G56438
AMCG00009326 mRNA downstream 8938 33902135 ~ 33935311 (-) True AMCG00009326
AMCG00009322 mRNA downstream 939959 33001428 ~ 33004290 (-) True AMCG00009322
AMCG00009321 mRNA downstream 986012 32950616 ~ 32958237 (-) True AMCG00009321
AMCG00009314 mRNA downstream 1004274 32928268 ~ 32939975 (-) True AMCG00009314
AMCG00009316 mRNA downstream 1040689 32895249 ~ 32903560 (-) True AMCG00009316
AMCG00009325 mRNA upstream 2981 33951147 ~ 33969816 (-) True AMCG00009325
AMCG00009327 mRNA upstream 22675 33970841 ~ 33976806 (-) True AMCG00009327
AMCG00009332 mRNA upstream 59855 34008021 ~ 34026160 (-) True AMCG00009332
AMCG00009333 mRNA upstream 93910 34042076 ~ 34050737 (-) True AMCG00009333
AMCG00009331 mRNA upstream 123670 34071836 ~ 34076094 (-) True AMCG00009331
TU69876 other downstream 2759283 31165011 ~ 31184966 (-) True AMCG00009275
TU69861 other downstream 2958254 30972953 ~ 30985995 (-) True AMCG00009269
TU69860 other downstream 2997038 30944367 ~ 30947211 (-) True G55881
TU69850 other downstream 3006998 30934564 ~ 30937251 (-) True G55878
TU69693 other downstream 3286637 30602579 ~ 30657612 (-) False AMCG00009265
TU70548 other upstream 279108 34227274 ~ 34229389 (-) False AMCG00009342
TU70552 other upstream 291318 34239484 ~ 34279180 (-) True G56438
TU70685 other upstream 1590721 35538887 ~ 35539810 (-) False G56546
TU70686 other upstream 1590721 35538887 ~ 35539810 (-) True G56546
TU70688 other upstream 1590721 35538887 ~ 35539810 (-) False G56546

Expression Profile