RNA id: AMCG00009329


Basic Information

Item Value
RNA id AMCG00009329
length 1463
RNA type mRNA
GC content 0.48
exon number 9
gene id AMCG00009329
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 33991608 ~ 34001073 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTTCTGAAATCTCTAGAGCCATGATTTTCCTTGGAATATTGCCTCTGCTTTTGTTGCACATCCTGTGTGGACAAGCAGATCTCCAAGATGAAATAATTGCAGACTTCTCTGTGAAGCTCTATCACCAGCTAAAGGCAGTgggaaatgaagaaaacatcaTCTATTCCCCACTAAGCATTGCAGTTGCTTTAGGAATGGTGGAGCTAGGGGCCCGTGGTTCAACTTTGAAAGAAATAAGACAAGTAATGGGATATGGCAACTTGAAAGTGGGAGAGGAGTTCACAATGCTAAAGAACCTCACACAGGCCCTGGCCGAAGAAGATAATCAGTACGTAGTTAAACTGGCTAATGCCCTTTTCCTACAAACTGGGATCCACTTTAACGAAGACTTTCTGCAGATgatgaaaaagtattttcacGCAGAACTGGAAACGGTGGACTTCAGTCAGTCGGCCGCTATTGCCGATCATATTAACAAGTGGGTGGAAAATCACACGGAGATGAAAATTCATGACCTACTCTCGGCGGATGATTTCAGCAGTGCTACTCGGCTGACCCTTATTAACGCCATCTATTTCCGAGGAAACTGGAAAAACCAGTTTCGGCCCGAGCACACTCGCACTTTCTCTTTCACGAAAGACGACGGCAATGAGGTGCAGACTCTAATGATGTACCAGCAGGGGGATTTCTACTACGGTGAATTCAGTGATGGCACTACAGAGGCGGGCGGGGTGTACCAGGTGTTGGAAATGCCATATGAAGGAGAGGAGATGAGCATGATGCTAGTTCTGCCTCGTCAAGAAGTGCCTTTGGCTGCACTGGAGCCAATTATTAAAGCTCAGCTGATAGAGGAATGGGCCAGCAGTGTTAAGAAGCAAAAGGTAGAAGTCTACTTGCCAAGATTTAAAGTAGAACAGAAGATTGACTTAAAGGAAACCTTGGAAGGTCTGGGCATTAAGAATATTTTTACTAAAGATGCTGATCTTTCAGCTATGACTGATGGGAAAGGTCTATTCATTAGGAAAGCCGTTCAGAAGGCATTCCTGGAGGTCACAGAGGAGGGAGCCGAAGGTGCCGCAGCTTCAGGCGAGTTCCCCTCTTTTATCGTCTCCCTGCTACGAATCTGGATGATTGCTCTCACAAGGACATTAGTGTTGTATCCACAAGTGATGGCAGATCACCCGTTTTTCTTCATTATCAGAGCCAGAAAGACAGgaacaATCCTTTTCATGGGGAGAGTGATGAACCCAGAGGTTATTGATACCAATGACCGTGACTTTGATGCACTCGATGCGCTGCAGCCTCGAGGGAAGACTGCAGGCCACCTGCGTGTGGAGCCACGTCACTTAGCAACGGGGCCGCTGCCCTGGCCAGCttctgttccccccccccccaagagcCACGGCGTCTCGCCTTTCAGCAGCCTGCCGTCGCACATGGGACTCGGCACACGGCTGGACCTC

Function

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG:

id description
K23412 SERPINI1; neuroserpin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU70350 lncRNA upstream 534436 33456891 ~ 33457172 (+) True G56282
TU70333 lncRNA upstream 709844 33281537 ~ 33281764 (+) True G56268
TU70327 lncRNA upstream 881589 33109739 ~ 33110019 (+) True G56262
TU70326 lncRNA upstream 884987 33106370 ~ 33106621 (+) True G56261
TU70258 lncRNA upstream 1040642 32948137 ~ 32950966 (+) True G56211
TU70463 lncRNA downstream 37061 34038134 ~ 34042259 (+) True G56376
TU70484 lncRNA downstream 44417 34045490 ~ 34078839 (+) True G56379
TU70574 lncRNA downstream 362426 34363499 ~ 34368674 (+) False AMCG00009345
TU70575 lncRNA downstream 362426 34363499 ~ 34366719 (+) False AMCG00009345
TU70601 lncRNA downstream 581874 34582947 ~ 34662345 (+) True G56474
AMCG00009324 mRNA upstream 414009 33534374 ~ 33577599 (+) True AMCG00009324
AMCG00009323 mRNA upstream 470623 33515937 ~ 33520985 (+) True AMCG00009323
AMCG00009320 mRNA upstream 540338 33437686 ~ 33451270 (+) True AMCG00009320
AMCG00009319 mRNA upstream 733797 33256469 ~ 33257811 (+) True AMCG00009319
AMCG00009317 mRNA upstream 936120 33050004 ~ 33055488 (+) True AMCG00009317
AMCG00009330 mRNA downstream 450 34001523 ~ 34005647 (+) True AMCG00009330
AMCG00009334 mRNA downstream 62491 34063564 ~ 34068571 (+) True AMCG00009334
AMCG00009337 mRNA downstream 79421 34080494 ~ 34090966 (+) True AMCG00009337
AMCG00009338 mRNA downstream 91653 34092726 ~ 34108014 (+) True AMCG00009338
AMCG00009336 mRNA downstream 118013 34119086 ~ 34121611 (+) True AMCG00009336
TU70069 other upstream 1826243 32161760 ~ 32165365 (+) True G56060
TU69474 other upstream 3996170 29995126 ~ 29995438 (+) True G55591
TU69455 other upstream 4080044 29907911 ~ 29911564 (+) True G55573
TU69299 other upstream 4816908 29173139 ~ 29174700 (+) True AMCG00009220
TU69269 other upstream 4884700 29103640 ~ 29106908 (+) False AMCG00009208
TU70456 other downstream 14597 34015670 ~ 34018815 (+) True G56369
TU70668 other downstream 1387841 35388914 ~ 35389327 (+) True G56536
TU70945 other downstream 3359028 37360101 ~ 37367671 (+) True AMCG00009405
TU71113 other downstream 3609270 37610343 ~ 37616283 (+) False AMCG00009428
TU71381 other downstream 4441182 38442255 ~ 38457592 (+) True G57105

Expression Profile