RNA id: AMCG00009360


Basic Information

Item Value
RNA id AMCG00009360
length 374
RNA type mRNA
GC content 0.58
exon number 2
gene id AMCG00009360
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 34689758 ~ 34690484 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TCACCTGCCCCCCCTAGCCCAGGGAATCGGCTATTAAAAGCTTGGAAATGGCCTTTGACGGGGAACACAGACCTATCGCAGACGCAGTGAGCCAGCAGGGCAGCTGCCGTAAAACCCCGCACGACCAGGGCAGGAGAGGAAGACGGCAGAGAATTAGCCTGTGCGACCAGTGGCTCATTCGGTGGATTACAACTTGTCGAAGAGGAATCGGACGAGACCCGATGATCCAGTGCAGAGGAAATCGGCAGAGCGAATTGACGGCGAGAGGCTACGATGAAGCTGATCTCATTGGTAAAGCCTATGGGTTCGTGGCCAAACGGCGGCGCGCACTTCCCTGCGGGGCTCGTGGTGGTGGTCCCAGTTGCGGGAATACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU70601 lncRNA upstream 27413 34582947 ~ 34662345 (+) True G56474
TU70574 lncRNA upstream 321084 34363499 ~ 34368674 (+) False AMCG00009345
TU70575 lncRNA upstream 323039 34363499 ~ 34366719 (+) False AMCG00009345
TU70484 lncRNA upstream 610919 34045490 ~ 34078839 (+) True G56379
TU70463 lncRNA upstream 647499 34038134 ~ 34042259 (+) True G56376
TU70625 lncRNA downstream 272270 34962754 ~ 34963224 (+) True G56495
TU70631 lncRNA downstream 329750 35020234 ~ 35067229 (+) True G56501
TU70674 lncRNA downstream 848403 35538887 ~ 35539780 (+) False G56541
TU70675 lncRNA downstream 848403 35538887 ~ 35539780 (+) False G56541
TU70676 lncRNA downstream 848403 35538887 ~ 35539780 (+) False G56541
AMCG00009357 mRNA upstream 12374 34637528 ~ 34677384 (+) True AMCG00009357
AMCG00009355 mRNA upstream 186499 34502648 ~ 34503259 (+) True AMCG00009355
AMCG00009349 mRNA upstream 259342 34399115 ~ 34430416 (+) True AMCG00009349
AMCG00009345 mRNA upstream 320501 34363419 ~ 34369257 (+) True AMCG00009345
AMCG00009346 mRNA upstream 327322 34355739 ~ 34362436 (+) True AMCG00009346
AMCG00009361 mRNA downstream 29527 34720011 ~ 34720679 (+) True AMCG00009361
AMCG00009359 mRNA downstream 50749 34741233 ~ 34741959 (+) True AMCG00009359
AMCG00009367 mRNA downstream 94194 34784678 ~ 34784977 (+) True AMCG00009367
AMCG00009368 mRNA downstream 153984 34844468 ~ 34865640 (+) True AMCG00009368
AMCG00009369 mRNA downstream 177160 34867644 ~ 34885946 (+) True AMCG00009369
TU70453 other upstream 658313 34000796 ~ 34031445 (+) True G56368
TU70456 other upstream 670943 34015670 ~ 34018815 (+) True G56369
TU70069 other upstream 2524393 32161760 ~ 32165365 (+) True G56060
TU69474 other upstream 4694320 29995126 ~ 29995438 (+) True G55591
TU69455 other upstream 4778194 29907911 ~ 29911564 (+) True G55573
TU70668 other downstream 698430 35388914 ~ 35389327 (+) True G56536
TU70945 other downstream 2669617 37360101 ~ 37367671 (+) True AMCG00009405
TU71113 other downstream 2919859 37610343 ~ 37616283 (+) False AMCG00009428
TU71381 other downstream 3751771 38442255 ~ 38457592 (+) True G57105
TU71670 other downstream 4744416 39434900 ~ 39436995 (+) True AMCG00009480

Expression Profile