RNA id: AMCG00009361


Basic Information

Item Value
RNA id AMCG00009361
length 462
RNA type mRNA
GC content 0.45
exon number 2
gene id AMCG00009361
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 34720011 ~ 34720679 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TATTTCGCTTTTTCTTCTGATTTGCCAATTTGTAAACCACAAGGAAACTTTCAGCTGAATGGGTTGTATAAAAAAGgtgactttgttttggggggaatatttgaaatgcatttaaaaacagtacatCCTGAACTGACCTTCACTTCAAAACCAGAGCAGCTGAGATGTGAGACGTTTTATTTTCCAGCTTTCCAGTGGGCACAGACAATGGTTTTTGCCATAgaggaaataaacaaagacCCTGCCCTTCTTCCTAACATCACTCTGGGCTACAGGCTGTATGACAACTGTGTCAACCTGGCCGTGGCATTTCGGGCAGCCACAGCCCTGATCAGCGGAGTGGGCGACACTTTCACCAACTACAGCTGTACAGGGACACCCCCAGTCTTAGGCATTGTTGGGGATCCTGGGTCAACTAATTCTATTGCCATATCCAGAATGCTGGGCCTTTTCCGTGTTCCT

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU70601 lncRNA upstream 57666 34582947 ~ 34662345 (+) True G56474
TU70574 lncRNA upstream 351337 34363499 ~ 34368674 (+) False AMCG00009345
TU70575 lncRNA upstream 353292 34363499 ~ 34366719 (+) False AMCG00009345
TU70484 lncRNA upstream 641172 34045490 ~ 34078839 (+) True G56379
TU70463 lncRNA upstream 677752 34038134 ~ 34042259 (+) True G56376
TU70625 lncRNA downstream 242075 34962754 ~ 34963224 (+) True G56495
TU70631 lncRNA downstream 299555 35020234 ~ 35067229 (+) True G56501
TU70674 lncRNA downstream 818208 35538887 ~ 35539780 (+) False G56541
TU70675 lncRNA downstream 818208 35538887 ~ 35539780 (+) False G56541
TU70676 lncRNA downstream 818208 35538887 ~ 35539780 (+) False G56541
AMCG00009360 mRNA upstream 29527 34689758 ~ 34690484 (+) True AMCG00009360
AMCG00009357 mRNA upstream 42627 34637528 ~ 34677384 (+) True AMCG00009357
AMCG00009355 mRNA upstream 216752 34502648 ~ 34503259 (+) True AMCG00009355
AMCG00009349 mRNA upstream 289595 34399115 ~ 34430416 (+) True AMCG00009349
AMCG00009345 mRNA upstream 350754 34363419 ~ 34369257 (+) True AMCG00009345
AMCG00009359 mRNA downstream 20554 34741233 ~ 34741959 (+) True AMCG00009359
AMCG00009367 mRNA downstream 63999 34784678 ~ 34784977 (+) True AMCG00009367
AMCG00009368 mRNA downstream 123789 34844468 ~ 34865640 (+) True AMCG00009368
AMCG00009369 mRNA downstream 146965 34867644 ~ 34885946 (+) True AMCG00009369
AMCG00009370 mRNA downstream 215369 34936048 ~ 34940627 (+) True AMCG00009370
TU70453 other upstream 688566 34000796 ~ 34031445 (+) True G56368
TU70456 other upstream 701196 34015670 ~ 34018815 (+) True G56369
TU70069 other upstream 2554646 32161760 ~ 32165365 (+) True G56060
TU69474 other upstream 4724573 29995126 ~ 29995438 (+) True G55591
TU69455 other upstream 4808447 29907911 ~ 29911564 (+) True G55573
TU70668 other downstream 668235 35388914 ~ 35389327 (+) True G56536
TU70945 other downstream 2639422 37360101 ~ 37367671 (+) True AMCG00009405
TU71113 other downstream 2889664 37610343 ~ 37616283 (+) False AMCG00009428
TU71381 other downstream 3721576 38442255 ~ 38457592 (+) True G57105
TU71670 other downstream 4714221 39434900 ~ 39436995 (+) True AMCG00009480

Expression Profile