RNA id: AMCG00009366


Basic Information

Item Value
RNA id AMCG00009366
length 506
RNA type mRNA
GC content 0.44
exon number 2
gene id AMCG00009366
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 34745118 ~ 34745790 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TTATGAAACTTACTCAGAATGTTAATATATTACTCAGTTTAGTTTTAAACGTTATTGCAGAAGAAGAACCTGCATGCACGATTCaagacacatttgttttgaatggtATGTATAAGAATGGGGATATTATTTTAGGAGGGATTTTTGCAATACACTTTAGTGCAGTAGTTCCCGACTTGCCGTTTATTTCCAAACCAGCACCATGGCAATGTGAGAGTTTTGATTTTGCAGCTTTCCAGTGGGCACAGACCATGGTTTTTGCTATTGAGGAAATAAACAGAGACCCTTCCCTTCTTCCTAACATCACTCTGGGCTACAGGATGTTTGACAACTGTGTTAACCTGGCTGTGGCATTTCGGGCAGCCACAGCCCTGATCAGCGGAGTGGGTGACACTTTCACTGACTACAGCTGTACAGGGACACCCCCAGTCTTAGGCATTGTTGGGGATCCTGGGTCAACACATTCTATTGCCATATCGAGGATGCTGGGCCTTTTCCATATGCCG

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU70572 lncRNA downstream 386080 34357273 ~ 34359038 (-) False AMCG00009347
TU70553 lncRNA downstream 429110 34239484 ~ 34316008 (-) False G56438
TU70554 lncRNA downstream 440207 34239484 ~ 34304911 (-) False G56438
TU70508 lncRNA downstream 620139 34123606 ~ 34124979 (-) True G56401
TU70494 lncRNA downstream 694958 34049187 ~ 34050160 (-) False AMCG00009333
TU70644 lncRNA upstream 414801 35160591 ~ 35160877 (-) True G56513
TU70646 lncRNA upstream 427086 35172876 ~ 35173249 (-) True G56515
TU70654 lncRNA upstream 602654 35348444 ~ 35348927 (-) True G56522
TU70664 lncRNA upstream 612550 35358340 ~ 35358650 (-) True G56532
TU70667 lncRNA upstream 630296 35376086 ~ 35376369 (-) True G56535
AMCG00009362 mRNA downstream 44597 34699864 ~ 34700521 (-) True AMCG00009362
AMCG00009358 mRNA downstream 111296 34625026 ~ 34633822 (-) True AMCG00009358
AMCG00009356 mRNA downstream 137675 34587493 ~ 34607443 (-) True AMCG00009356
AMCG00009351 mRNA downstream 162603 34567019 ~ 34582515 (-) True AMCG00009351
AMCG00009352 mRNA downstream 214676 34513261 ~ 34530442 (-) True AMCG00009352
AMCG00009364 mRNA upstream 20044 34765834 ~ 34768066 (-) True AMCG00009364
AMCG00009365 mRNA upstream 86744 34832534 ~ 34833167 (-) True AMCG00009365
AMCG00009363 mRNA upstream 98729 34844519 ~ 34856467 (-) True AMCG00009363
AMCG00009373 mRNA upstream 677688 35423478 ~ 35805085 (-) True AMCG00009373
AMCG00009374 mRNA upstream 1161422 35907212 ~ 35908512 (-) True AMCG00009374
TU70552 other downstream 465938 34239484 ~ 34279180 (-) True G56438
TU70548 other downstream 515729 34227274 ~ 34229389 (-) False AMCG00009342
TU69876 other downstream 3560152 31165011 ~ 31184966 (-) True AMCG00009275
TU69861 other downstream 3759123 30972953 ~ 30985995 (-) True AMCG00009269
TU69860 other downstream 3797907 30944367 ~ 30947211 (-) True G55881
TU70685 other upstream 793097 35538887 ~ 35539810 (-) False G56546
TU70686 other upstream 793097 35538887 ~ 35539810 (-) True G56546
TU70688 other upstream 793097 35538887 ~ 35539810 (-) False G56546
TU70712 other upstream 1126333 35872123 ~ 35872597 (-) True G56568
TU70990 other upstream 2470170 37215960 ~ 37220076 (-) True G56800

Expression Profile