RNA id: AMCG00009378



Basic Information


Item Value
RNA id AMCG00009378
length 768
RNA type mRNA
GC content 0.42
exon number 4
gene id AMCG00009378
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 36410058 ~ 36417003 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TCAGCAGAGAAGCCAATTTGTAGACTACAAGGCAGACCAGACCTGCCCACATTTTCAAAGAATGGGGACATTTTAATCGgaggtttattttcattaaaaccaaGAATGGTTAGTACAATGAACAACTTCACAAGTTTGCCAAAACCTACAAAATGCAACGGGATACATTTCAGAGAATTTCAACATGCCCAGACCATGATTTTCACCATAGAGGAAATAAACAACAGTACAGATATTCTCCCCAATGTCATCTTGGGCTATAGGATCCACAGCGTGTGTCCAGATATACTATCAACATTGAGGAGTGCTTTTAATTTAGTGAACGGCCAGGAGGAAGGAAATCTCTCTGAAAACTCCTGCACCAAACCACCTAACGTCCATGCAATTATAGGACAAGCAGACTCATCTGTAACAATAGGAACTGCAACATCTCTCGGACCTTTCAATGTGCCATTGATTAGTCACCTTGCTACCTGTGCATGCCTGAGCAACAGAAGAAGATTTCCCTCATTCTTCAGAACCATCCCCAGTGATTATTACCAAAGCAGAGCCCTGGCACAGCTTGTCAGGCActttggatggacctgggttggggccATTAGGAGTGATAATGATTATGGCAACAAGAGGCCAATATGTAAGCTGCAATTCAGACCAGAACTGCCCGCATTCTCAAAGAATAGGGACTTTTTAATTAggtctattttatttaaaaacagggaTGTTCAGTACAACTTCATAACTGTGCCAGAACCTACAGAATGCAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU70730 lncRNA upstream 375363 35948851 ~ 36034695 (+) False G56584
TU70728 lncRNA upstream 458076 35927372 ~ 35951982 (+) True G56584
TU70726 lncRNA upstream 483863 35925938 ~ 35926195 (+) True G56582
TU70711 lncRNA upstream 539018 35870828 ~ 35871040 (+) True G56567
TU70680 lncRNA upstream 833132 35575046 ~ 35576926 (+) True G56542
TU70770 lncRNA downstream 59435 36476438 ~ 36479375 (+) True G56623
TU70776 lncRNA downstream 210192 36627195 ~ 36631814 (+) True G56629
TU70777 lncRNA downstream 210192 36627195 ~ 36631814 (+) False G56629
TU70862 lncRNA downstream 458075 36875078 ~ 36875398 (+) True G56698
TU70857 lncRNA downstream 483290 36900293 ~ 36975061 (+) True G56694
AMCG00009376 mRNA upstream 203560 36205885 ~ 36206498 (+) True AMCG00009376
AMCG00009377 mRNA upstream 204174 36204810 ~ 36205884 (+) True AMCG00009377
AMCG00009375 mRNA upstream 563377 35845970 ~ 35846681 (+) True AMCG00009375
AMCG00009372 mRNA upstream 1317172 35085474 ~ 35092886 (+) True AMCG00009372
AMCG00009371 mRNA upstream 1343726 35062938 ~ 35066332 (+) True AMCG00009371
AMCG00009380 mRNA downstream 98191 36515194 ~ 36515726 (+) True AMCG00009380
AMCG00009379 mRNA downstream 111943 36528946 ~ 36545717 (+) True AMCG00009379
AMCG00009381 mRNA downstream 159214 36576217 ~ 36611929 (+) True AMCG00009381
AMCG00009386 mRNA downstream 273830 36690833 ~ 36698116 (+) True AMCG00009386
AMCG00009387 mRNA downstream 287286 36704289 ~ 36731243 (+) True AMCG00009387
TU70668 other upstream 1020731 35388914 ~ 35389327 (+) True G56536
TU70453 other upstream 2378613 34000796 ~ 34031445 (+) True G56368
TU70456 other upstream 2391243 34015670 ~ 34018815 (+) True G56369
TU70069 other upstream 4244693 32161760 ~ 32165365 (+) True G56060
TU69474 other upstream 6414620 29995126 ~ 29995438 (+) True G55591
TU70945 other downstream 943098 37360101 ~ 37367671 (+) True AMCG00009405
TU71113 other downstream 1193340 37610343 ~ 37616283 (+) False AMCG00009428
TU71381 other downstream 2025252 38442255 ~ 38457592 (+) True G57105
TU71670 other downstream 3017897 39434900 ~ 39436995 (+) True AMCG00009480
TU71802 other downstream 3531003 39948006 ~ 39949200 (+) True G57430

Expression Profile