RNA id: AMCG00009380



Basic Information


Item Value
RNA id AMCG00009380
length 453
RNA type mRNA
GC content 0.41
exon number 2
gene id AMCG00009380
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 36515194 ~ 36515726 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TCAGCAGAGAAGCCAATTTGTAGGTTGCAAGGGACACCAGACCTGCCCACATTTTCAAAGAATGGAGACATTTTAATTGgaggtttattttcattaaaaccaaGGATGGTTAGTACAATGAACAACTTCACAAGTATGTCAAAACCTACAGAATGCAATGGaatacatttcagaaatgttcagCTTGCCCAGTCCATGATCTTCACTATAGAGGAAATAAACAACAGTACAGATATTCTCCCCAATGTTACCTTGGGCTACAGGATCCACAGTGTGTGTTCAAATATACCAGCAACATTAAGGGGTGCTTTTAGTTTAGTGAATGGCCAGGAGGAAGGAGTTCTCTCTGAAAACTCCTGCACCAAACCACCTAACGTCCATGCAATTATAGGACAAGCAGACTCATCTGTAACAATCGGAACTGCAACATCTCTCGGACCTTTCAATGTGCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU70770 lncRNA upstream 35819 36476438 ~ 36479375 (+) True G56623
TU70730 lncRNA upstream 480499 35948851 ~ 36034695 (+) False G56584
TU70728 lncRNA upstream 563212 35927372 ~ 35951982 (+) True G56584
TU70726 lncRNA upstream 588999 35925938 ~ 35926195 (+) True G56582
TU70711 lncRNA upstream 644154 35870828 ~ 35871040 (+) True G56567
TU70776 lncRNA downstream 111469 36627195 ~ 36631814 (+) True G56629
TU70777 lncRNA downstream 111469 36627195 ~ 36631814 (+) False G56629
TU70862 lncRNA downstream 359352 36875078 ~ 36875398 (+) True G56698
TU70857 lncRNA downstream 384567 36900293 ~ 36975061 (+) True G56694
TU70891 lncRNA downstream 513480 37029206 ~ 37029542 (+) True G56712
AMCG00009378 mRNA upstream 98191 36410058 ~ 36417003 (+) True AMCG00009378
AMCG00009376 mRNA upstream 308696 36205885 ~ 36206498 (+) True AMCG00009376
AMCG00009377 mRNA upstream 309310 36204810 ~ 36205884 (+) True AMCG00009377
AMCG00009375 mRNA upstream 668513 35845970 ~ 35846681 (+) True AMCG00009375
AMCG00009372 mRNA upstream 1422308 35085474 ~ 35092886 (+) True AMCG00009372
AMCG00009379 mRNA downstream 13220 36528946 ~ 36545717 (+) True AMCG00009379
AMCG00009381 mRNA downstream 60491 36576217 ~ 36611929 (+) True AMCG00009381
AMCG00009386 mRNA downstream 175107 36690833 ~ 36698116 (+) True AMCG00009386
AMCG00009387 mRNA downstream 188563 36704289 ~ 36731243 (+) True AMCG00009387
AMCG00009392 mRNA downstream 393370 36909096 ~ 37086094 (+) True AMCG00009392
TU70668 other upstream 1125867 35388914 ~ 35389327 (+) True G56536
TU70453 other upstream 2483749 34000796 ~ 34031445 (+) True G56368
TU70456 other upstream 2496379 34015670 ~ 34018815 (+) True G56369
TU70069 other upstream 4349829 32161760 ~ 32165365 (+) True G56060
TU69474 other upstream 6519756 29995126 ~ 29995438 (+) True G55591
TU70945 other downstream 844375 37360101 ~ 37367671 (+) True AMCG00009405
TU71113 other downstream 1094617 37610343 ~ 37616283 (+) False AMCG00009428
TU71381 other downstream 1926529 38442255 ~ 38457592 (+) True G57105
TU71670 other downstream 2919174 39434900 ~ 39436995 (+) True AMCG00009480
TU71802 other downstream 3432280 39948006 ~ 39949200 (+) True G57430

Expression Profile