Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00009407 |
| length | 972 |
| RNA type | mRNA |
| GC content | 0.65 |
| exon number | 4 |
| gene id | AMCG00009407 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 37275462 ~ 37277549 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016070 | RNA metabolic process | biological_process |
| GO:0090305 | nucleic acid phosphodiester bond hydrolysis | biological_process |
| id | description |
|---|---|
| K15323 | TSEN34; tRNA-splicing endonuclease subunit Sen34 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU70983 | lncRNA | downstream | 7631 | 37201032 ~ 37267831 (-) | False | G56795 |
| TU70984 | lncRNA | downstream | 49460 | 37201032 ~ 37226002 (-) | True | G56795 |
| TU70924 | lncRNA | downstream | 107218 | 37167994 ~ 37168244 (-) | True | G56742 |
| TU70874 | lncRNA | downstream | 403639 | 36869548 ~ 36871823 (-) | True | G56710 |
| TU70758 | lncRNA | downstream | 881944 | 36096808 ~ 36393518 (-) | True | G56612 |
| TU71004 | lncRNA | upstream | 3194 | 37280743 ~ 37281091 (-) | False | AMCG00009409 |
| TU71005 | lncRNA | upstream | 3669 | 37281218 ~ 37285365 (-) | False | AMCG00009409 |
| TU71007 | lncRNA | upstream | 16343 | 37293892 ~ 37297002 (-) | False | AMCG00009408 |
| TU71009 | lncRNA | upstream | 16343 | 37293892 ~ 37394988 (-) | False | AMCG00009408 |
| TU71014 | lncRNA | upstream | 22995 | 37300544 ~ 37367669 (-) | False | G56818 |
| AMCG00009394 | mRNA | downstream | 178135 | 37088783 ~ 37097327 (-) | True | AMCG00009394 |
| AMCG00009390 | mRNA | downstream | 354323 | 36900293 ~ 36921139 (-) | True | AMCG00009390 |
| AMCG00009391 | mRNA | downstream | 400733 | 36873672 ~ 36874729 (-) | True | AMCG00009391 |
| AMCG00009389 | mRNA | downstream | 435125 | 36840116 ~ 36840337 (-) | True | AMCG00009389 |
| AMCG00009388 | mRNA | downstream | 507742 | 36733179 ~ 36767720 (-) | True | AMCG00009388 |
| AMCG00009411 | mRNA | upstream | 1337 | 37278886 ~ 37279752 (-) | True | AMCG00009411 |
| AMCG00009409 | mRNA | upstream | 2999 | 37280548 ~ 37285304 (-) | True | AMCG00009409 |
| AMCG00009408 | mRNA | upstream | 8027 | 37285576 ~ 37297182 (-) | True | AMCG00009408 |
| AMCG00009406 | mRNA | upstream | 22979 | 37300528 ~ 37305420 (-) | True | AMCG00009406 |
| AMCG00009412 | mRNA | upstream | 49206 | 37326755 ~ 37332027 (-) | True | AMCG00009412 |
| TU70990 | other | downstream | 55386 | 37215960 ~ 37220076 (-) | True | G56800 |
| TU70712 | other | downstream | 1402865 | 35872123 ~ 35872597 (-) | True | G56568 |
| TU70685 | other | downstream | 1735652 | 35538887 ~ 35539810 (-) | False | G56546 |
| TU70686 | other | downstream | 1735652 | 35538887 ~ 35539810 (-) | True | G56546 |
| TU70688 | other | downstream | 1735652 | 35538887 ~ 35539810 (-) | False | G56546 |
| TU71449 | other | upstream | 1302736 | 38580285 ~ 38582820 (-) | True | G57155 |
| TU71520 | other | upstream | 1557767 | 38835316 ~ 38837564 (-) | False | AMCG00009472 |
| TU71924 | other | upstream | 2871176 | 40148725 ~ 40157471 (-) | False | AMCG00009521 |
| TU72548 | other | upstream | 5391578 | 42669127 ~ 42673707 (-) | True | G58025 |
| TU72928 | other | upstream | 6204872 | 43482421 ~ 43945297 (-) | True | G58333 |
