RNA id: AMCG00009423


Basic Information

Item Value
RNA id AMCG00009423
length 1866
RNA type mRNA
GC content 0.49
exon number 7
gene id AMCG00009423
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 37537521 ~ 37543355 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TAGCTCTCCGCACAGCTGCAATGACTCAGTCAGATCACAGTCGGTTTAAAATAGGATGTTTCTTCATGGCTGCATGTCTCATACAATATGAATGTATCGctacacaacacaaactctAAAGTCAGGATAGTTTAATCTAAAATCTCTTTGTgggaatatacatttatttgactttttttaatggagCTTGTTTACTAATCTCTCGGCTTTGAGGACAGGGATCAAGGCTGTGGGccttttgggattttttttacttttcaaccAACATTCATTCAGTTTGCTTATATAAGCTCTGCGTGCTTCCTCTGTCAGGATGAagcggtgtgtgtgtttgtggctgTTAGCCCAGCTGCTGTGTGGCTGCGTGAGCGGCTCACGTGCCTCTCCCGTGCACCCCGGCTCCTGTGAGGACCCCCACGCCCTGGCAGCTGCAGACTTGGCCCTGGGCAAGATCAACACTGACCGCAGCGAGGGCTTCGTCTTCAGCTTGAACCGCCTGAATAATGTCAACCACCAGCAGCACGGCACCACAGGAATGGTCTTTTACTTGACTATGGATGTTCTGGAGACCAGCTGTCACATTCTCAGCAAGAGGGACTGGAAGAGCTGTGCAATCAGACAGACACATGACACACCCGTCTATGGGCAATGTAAGGCCACAATCTACATTAACAAAGTTCAAAGAATCGTCCAACTATACAACTACGACTGTGTCCTCAGACCAGCCCCCAAGTCCAGAATTCAGAAGATATGTCCCGACTGTCCCTCTCAGGTCTCTACTGAGGATGACAACATCCTGAGAACAGCTAATATGGCCTTGGAGAAATATAACAGAGAGAGTGGAAATTCCAACTATTTTGCTCTTCTGAACATAACTAGAGCTTCTTCACAGTGGGATTTCGGTGAATTCTACTTTGTGGAATTCATCATTCAGGAAACGGTGTGCTCCAATGGCACTGACATCATCCACGTTGCCGAATGTGAACTGATGAGCTGCGAGTTTGCACACAAAGGTCACTGCAAAGGATCACAAGCCCGTTCACAGGGTAAAGAGTATGTCACGGTCTCCTGCGACATCTTCGAAACCAAGagCTCCGAAAAGCAGAAAAAGCAGCACTTGCTGGAGACGGGCCACAGTCACGGGGGACGCCTGGGACACCGGCATCGACACACTCACCTTCATCCCCACGAACACCACCACGACCATACCCCTGCTGCACCCACCTCCCCAACTCCCGAGCGCCCGCTGGGGACAGTGCAGTACCTCCCTGCTCTGAAGCAGCTCTTCACCTTGCCCTCCTTCCACGATGAGTACCCCACTTCCTTCCCCGCCCAGCCCGTGCCCCTGCCCATCTTCCCAGACCAGCCAGAGAGGGAGCAGCCTGCCAATCCCACTGGCATCCTGGTTGTTCCCGAGACAGTGCCGGAGACTGGTGAGGAGGATCCAGTCTTCTTGCCCTTTCCCAGCACCCTCTCTATGAGGTGTCCAGGAAAGCCCAAAAATGTGCATCCCCTGCTGCAGGAGCTCTTTGGAGAGGACCCACTCTTCCACCACCCCATCGACATAGTAGGGTGACCGTCTTCCAGCATGAACTGCAGGAGAACTGAATCACTTCGGTCCTCTACTAACCtaagtgtttctctctctcccccacaatGCAATGCGGAATCACCTGTACTAGTAGAATGCAGGGAATAAAGCATTTTGGAAGTTGACTGCAATTTGTGTCaagatcattttttaatttttgtagtattcaaaataaatgaaaactaatGAAAACAAGTGCCTGGAGCATAAGCATAGTAGATTAAATATAGtggattaaatattacaaaatatttataggtACAAACATGTAGGTG

Function

GO: NA

KEGG:

id description
K23411 FETUB; fetuin-B

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU71067 lncRNA downstream 19867 37515969 ~ 37517654 (-) True G56861
TU71046 lncRNA downstream 68213 37467273 ~ 37469308 (-) False AMCG00009417
TU71032 lncRNA downstream 115000 37418414 ~ 37422521 (-) True G56831
TU71016 lncRNA downstream 169852 37315570 ~ 37367669 (-) False G56818
TU71015 lncRNA downstream 231531 37300544 ~ 37305990 (-) True G56818
TU71165 lncRNA upstream 93350 37636705 ~ 37734188 (-) True G56927
TU71208 lncRNA upstream 363050 37906405 ~ 37907571 (-) False AMCG00009437
TU71277 lncRNA upstream 575073 38118428 ~ 38118843 (-) True G57013
TU71279 lncRNA upstream 581794 38125149 ~ 38125363 (-) True G57015
TU71280 lncRNA upstream 582626 38125981 ~ 38127340 (-) True G57016
AMCG00009426 mRNA downstream 1627 37530723 ~ 37535894 (-) True AMCG00009426
AMCG00009422 mRNA downstream 9333 37525531 ~ 37528188 (-) True AMCG00009422
AMCG00009417 mRNA downstream 61486 37467254 ~ 37476035 (-) True AMCG00009417
AMCG00009416 mRNA downstream 134640 37360085 ~ 37402881 (-) True AMCG00009416
AMCG00009412 mRNA downstream 205494 37326755 ~ 37332027 (-) True AMCG00009412
AMCG00009425 mRNA upstream 884 37544239 ~ 37550476 (-) True AMCG00009425
AMCG00009424 mRNA upstream 11458 37554813 ~ 37559533 (-) True AMCG00009424
AMCG00009433 mRNA upstream 72704 37616059 ~ 37620375 (-) True AMCG00009433
AMCG00009430 mRNA upstream 77939 37621294 ~ 37633873 (-) True AMCG00009430
AMCG00009432 mRNA upstream 95184 37638539 ~ 37662063 (-) True AMCG00009432
TU70990 other downstream 317445 37215960 ~ 37220076 (-) True G56800
TU70712 other downstream 1664924 35872123 ~ 35872597 (-) True G56568
TU70685 other downstream 1997711 35538887 ~ 35539810 (-) False G56546
TU71449 other upstream 1036930 38580285 ~ 38582820 (-) True G57155
TU71520 other upstream 1291961 38835316 ~ 38837564 (-) False AMCG00009472
TU71924 other upstream 2605370 40148725 ~ 40157471 (-) False AMCG00009521
TU72548 other upstream 5125772 42669127 ~ 42673707 (-) True G58025
TU72928 other upstream 5939066 43482421 ~ 43945297 (-) True G58333

Expression Profile