Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00009444 |
| length | 570 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 5 |
| gene id | AMCG00009444 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 38092400 ~ 38094123 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005761 | mitochondrial ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K17428 | MRPL47, NCM1; large subunit ribosomal protein L47 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU71241 | lncRNA | upstream | 24247 | 38063790 ~ 38068153 (+) | True | G56982 |
| TU71111 | lncRNA | upstream | 475704 | 37611255 ~ 37616696 (+) | True | AMCG00009428 |
| TU71098 | lncRNA | upstream | 539259 | 37548313 ~ 37553141 (+) | False | AMCG00009429 |
| TU71031 | lncRNA | upstream | 628895 | 37460042 ~ 37463505 (+) | True | AMCG00009415 |
| TU70966 | lncRNA | upstream | 795398 | 37293903 ~ 37297002 (+) | True | AMCG00009404 |
| TU71255 | lncRNA | downstream | 35959 | 38130082 ~ 38133966 (+) | True | G56995 |
| TU71304 | lncRNA | downstream | 108671 | 38202794 ~ 38280479 (+) | True | G57036 |
| TU71462 | lncRNA | downstream | 533796 | 38627919 ~ 38628135 (+) | True | G57161 |
| TU71465 | lncRNA | downstream | 538974 | 38633097 ~ 38633351 (+) | True | G57164 |
| TU71480 | lncRNA | downstream | 663257 | 38757380 ~ 38834945 (+) | True | G57175 |
| AMCG00009438 | mRNA | upstream | 33127 | 38031385 ~ 38059273 (+) | True | AMCG00009438 |
| AMCG00009427 | mRNA | upstream | 471010 | 37619502 ~ 37621390 (+) | True | AMCG00009427 |
| AMCG00009428 | mRNA | upstream | 479505 | 37608305 ~ 37612895 (+) | False | AMCG00009428 |
| AMCG00009429 | mRNA | upstream | 487276 | 37530822 ~ 37605124 (+) | True | AMCG00009429 |
| AMCG00009419 | mRNA | upstream | 570947 | 37520323 ~ 37521453 (+) | True | AMCG00009419 |
| AMCG00009443 | mRNA | downstream | 31185 | 38125308 ~ 38129404 (+) | True | AMCG00009443 |
| AMCG00009442 | mRNA | downstream | 53852 | 38147975 ~ 38150946 (+) | True | AMCG00009442 |
| AMCG00009449 | mRNA | downstream | 100724 | 38194847 ~ 38206084 (+) | True | AMCG00009449 |
| AMCG00009450 | mRNA | downstream | 112861 | 38206984 ~ 38241384 (+) | True | AMCG00009450 |
| AMCG00009457 | mRNA | downstream | 239925 | 38334048 ~ 38354970 (+) | True | AMCG00009457 |
| TU71113 | other | upstream | 476117 | 37610343 ~ 37616283 (+) | False | AMCG00009428 |
| TU70945 | other | upstream | 724729 | 37360101 ~ 37367671 (+) | True | AMCG00009405 |
| TU70668 | other | upstream | 2703073 | 35388914 ~ 35389327 (+) | True | G56536 |
| TU70453 | other | upstream | 4060955 | 34000796 ~ 34031445 (+) | True | G56368 |
| TU71381 | other | downstream | 348132 | 38442255 ~ 38457592 (+) | True | G57105 |
| TU71670 | other | downstream | 1340777 | 39434900 ~ 39436995 (+) | True | AMCG00009480 |
| TU71802 | other | downstream | 1853883 | 39948006 ~ 39949200 (+) | True | G57430 |
| TU71881 | other | downstream | 2008260 | 40102383 ~ 40104948 (+) | False | AMCG00009516 |
| TU72035 | other | downstream | 2896679 | 40990802 ~ 40994659 (+) | True | G57604 |
