RNA id: AMCG00009459


Basic Information

Item Value
RNA id AMCG00009459
length 1614
RNA type mRNA
GC content 0.39
exon number 4
gene id AMCG00009459
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38474184 ~ 38481035 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGAGGAGCGAAATGTGTCGGATTGCCATTTTTATGCCACGTCATAGTTTATTGTTACACGATATATCAAGAAAAACGGATATCGTTGATGTTAATCCCCGACTGTATTAATTTTTGTCTTGGTAATCCACGCTCGAATTTCGGAAAAAATACCGCTCCGCGGGGTCATGACCCTATAATCTTAACAACTGTTTACCCGattatttgctttttgtgtattttttataccTCGGTTGTGGGATACATTTAGATTATTCCTACATTCACAAACGGTGTGACGTTTCCCCGTAAAACCGTGCCCgctatttataattattttattttattattgtggaAAGAGTAGTCCGTTGTCCCGTCCGCTGTCATGGTAACTGCAAAGCGTCCCAAAATGGCGGCGCTGCTGGAGGAGCCCGTTTTTGAAATCAGTGGCCAGGGCCCTGCGCCCTCCAAAGACTTCTTCCAGTTGCTTGTGACAAAGACTAAAGTGATCTGGAGGTGGTGGAAAATCTCTCTCCGAAGTGAATTTCGGAACACAGTGCCGGGGGAACTTAAAGAATCGCACCAAGATTTTGTAGATGATTCCAGTCTTCAGGACGTGGCACGGCTTGCCCAGACATCACAGAAATTTAAAAAGCTGTGTAACTCAGAGGAGGTTTGGGAGCAGATCGTGGAGAGGCACTGTGACACAGTTACTCCAGAGATGAGGTCTTTGGCCAAAGAGAGGGGCTGGAAGGAGATTTTCTTCTGCAACAAACTGCAGCTTCAGATGCACATCAGTAGAAAAAGGCTAATGCAGGATCATGACAATGCACCCGAGGAACGAATCTGACTACATTAACCTTATATGAGCTGTATTCTTGTCTCAAACCATAAAcgtaaatcagttttttttttttttttaccatgacaaaattaacattttacagtttcGACATGTTCTGTTCCGTGAAATAAATTTGGGATGTGAAAGTATTGCAATGTTTACCTTATCTTCTCTATCTCCAACCACTTTCAATCTACTGGTAAGCTGTTCAAACTAACTTGGCCACCCAATCCCATATTCATGCAATCGTACATGATCTGAGTTCTGCgttatatatgtgtatctgtTCTGAGGTTTGCAGTGTATGTGTCATCGCATCTCTTTAAGAATAAATTCAAAGAATGACGAAAAACGACTCTTCTGAAGAATCGAACTTTTACAAtgcagttacattttcaaaagaccGTAAGCTGAATGTTTTAGTAGCTGTGATTAATTTTGTCTTCAAAAATGTCTATGAATGCGGTACAAATAGGTCGTTAATgaagatgtgtttgttttagggaAAGAATTCACACAGTATTAACTTTTCAATGAGTTTCACACAATGACAGAACTGCCATATTTCGTTATTCGTGGATGCATTTTACCTATGCACTATTTCATGTTCTTGCATAACATTGTGtgtaagttttgttttctttataaagaTACTATTAACAGTGCCTCAAATGGGTGCCTACACTTATAGTTATAGTACGATGCACAAACCTTATCTCAGCCTTATTTTCTGTTCAATCCTCCTTTAATTAGTAGCCACTGTCATTTCTcaatacagatttttaaaaatgc

Function

GO: NA

KEGG:

id description
K10312 FBXO36; F-box protein 36

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU71275 lncRNA downstream 340218 38129295 ~ 38133966 (-) True G57011
TU71274 lncRNA downstream 340218 38130081 ~ 38133966 (-) False G57011
TU71282 lncRNA downstream 344982 38128984 ~ 38129202 (-) True G57018
TU71281 lncRNA downstream 346506 38127468 ~ 38127678 (-) True G57017
TU71280 lncRNA downstream 346844 38125981 ~ 38127340 (-) True G57016
TU71435 lncRNA upstream 20083 38501118 ~ 38503129 (-) True G57143
TU71466 lncRNA upstream 152077 38633112 ~ 38633397 (-) True G57165
TU71506 lncRNA upstream 291391 38772426 ~ 38773951 (-) True G57194
TU71580 lncRNA upstream 600386 39081421 ~ 39083424 (-) True G57244
TU71700 lncRNA upstream 1099576 39580611 ~ 39588074 (-) True G57351
AMCG00009461 mRNA downstream 37575 38432575 ~ 38436609 (-) True AMCG00009461
AMCG00009460 mRNA downstream 59863 38378812 ~ 38414321 (-) True AMCG00009460
AMCG00009458 mRNA downstream 106651 38357920 ~ 38367533 (-) True AMCG00009458
AMCG00009455 mRNA downstream 154751 38317970 ~ 38319433 (-) True AMCG00009455
AMCG00009454 mRNA downstream 176350 38290897 ~ 38297834 (-) True AMCG00009454
AMCG00009467 mRNA upstream 273815 38754850 ~ 38762930 (-) True AMCG00009467
AMCG00009471 mRNA upstream 294523 38775558 ~ 38810559 (-) True AMCG00009471
AMCG00009470 mRNA upstream 336160 38817195 ~ 38820080 (-) True AMCG00009470
AMCG00009472 mRNA upstream 346930 38827965 ~ 38837594 (-) True AMCG00009472
AMCG00009475 mRNA upstream 427987 38909022 ~ 38935195 (-) True AMCG00009475
TU70990 other downstream 1254108 37215960 ~ 37220076 (-) True G56800
TU70712 other downstream 2601587 35872123 ~ 35872597 (-) True G56568
TU70685 other downstream 2934374 35538887 ~ 35539810 (-) False G56546
TU71449 other upstream 99250 38580285 ~ 38582820 (-) True G57155
TU71520 other upstream 354281 38835316 ~ 38837564 (-) False AMCG00009472
TU71924 other upstream 1667690 40148725 ~ 40157471 (-) False AMCG00009521
TU72548 other upstream 4188092 42669127 ~ 42673707 (-) True G58025
TU72928 other upstream 5001386 43482421 ~ 43945297 (-) True G58333

Expression Profile