RNA id: AMCG00009467


Basic Information

Item Value
RNA id AMCG00009467
length 1187
RNA type mRNA
GC content 0.50
exon number 11
gene id AMCG00009467
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38754850 ~ 38762930 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGCTTCCAGGCCTTTCCTTTGCGCCTGCGCGGTGGCCGCCTTTCACAGCGTCGCTatagtgactgtgtgtgtacgGAGAGGAGATGAAGCTCAAACGGTTCCTGCTGCGATATTACCCCCCAGGGATCATTCTGGAGTATGAGAAAGGAGGGGAGCTCAAGACAAAATCAATCGATCTGTTGGATCTGTCCCCAGAGACAAACATTGATGAATTAACGGAAGAAATCAAGAGGACAGAACTGCTCATCACTCCCTCCCGGACAGAGCAAGTCAAACAGCTGATCCAGAGGCTGCAGGAGAAGCTCGGACAGCAGGACGATCGCAGGTTTTACCTCTTCAAGGTACTCCGGGCACACATCCTACCACTGACAAATGTGGCTTTTAATAAATCGGGGTCAAGCTTCATCACTGGCAGCTACGACAGGACGTGCAAAATATGGGACACGGCGTCGGGAGAGGAGCTGCACACACTGGAAGGACACAGAAACGTTGTCTATGCAATCGCTTTCAACAACCCCTATGGagaCAAAATTGCTACTGGATCCTTTGACAAGACATGCAAACTGTGGAGCGCAGAGACAGGGAAGTGTTACCATACTTTCCGAGGACATACTGCGGAAATTGTGTGTTTGTCATTTAATCCACAAAGTACCCTTGTGGCAACAGGCAGTATGGACACCACTGCAAAACTGTGGGACATCCAGACAGGAGAGGAGGCTGCAACACTAACAGGCCATTCAGCTGAAATAATCTCCCTGTCATTTAACACCATAGGAGACCAAATCATCACAGGCTCCTTTGACCATACAGTGTCACTGTGGGATGTTCAGTCAGGAAGGCGAATCCACACATTAAGAGGCCATAGAGGGGAAATAAGCAGCGCCCAGTTCAACTGGGATTGTTCTCTGATTGCAACAGGATCAATGGATAAAACTTGCATGCTCTGGGATGCAGTCAATGGGAAGTGCTTGGCGACTCTGACGGGACACGAAGACGAAGTGTTGGATGTGTGCTTTGATTACACTGGGCAGCTGATTGCAACTGCGTCCGCCGACGGGACGGCAAGGATTTACAGCTCCGCCTCACAGAAGTGCATCACTAAGCTGGAGGGACACGAAGGGGAGATTTCAAAGGTGAGCGATACGAGCCTCTTTGCCGAAAATGGGAAAGGAAATTTGCACGAGTAA

Function

GO: NA

KEGG:

id description
K19760 DAW1; dynein assembly factor with WDR repeat domains 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU71466 lncRNA downstream 121453 38633112 ~ 38633397 (-) True G57165
TU71435 lncRNA downstream 251721 38501118 ~ 38503129 (-) True G57143
TU71275 lncRNA downstream 620884 38129295 ~ 38133966 (-) True G57011
TU71274 lncRNA downstream 620884 38130081 ~ 38133966 (-) False G57011
TU71282 lncRNA downstream 625648 38128984 ~ 38129202 (-) True G57018
TU71506 lncRNA upstream 9496 38772426 ~ 38773951 (-) True G57194
TU71580 lncRNA upstream 318491 39081421 ~ 39083424 (-) True G57244
TU71700 lncRNA upstream 817681 39580611 ~ 39588074 (-) True G57351
TU71703 lncRNA upstream 825756 39588686 ~ 39588911 (-) True G57354
TU71735 lncRNA upstream 1043705 39806635 ~ 39806927 (-) True G57379
AMCG00009459 mRNA downstream 273815 38474184 ~ 38481035 (-) True AMCG00009459
AMCG00009461 mRNA downstream 318241 38432575 ~ 38436609 (-) True AMCG00009461
AMCG00009460 mRNA downstream 340529 38378812 ~ 38414321 (-) True AMCG00009460
AMCG00009458 mRNA downstream 387317 38357920 ~ 38367533 (-) True AMCG00009458
AMCG00009455 mRNA downstream 435417 38317970 ~ 38319433 (-) True AMCG00009455
AMCG00009471 mRNA upstream 12628 38775558 ~ 38810559 (-) True AMCG00009471
AMCG00009470 mRNA upstream 54265 38817195 ~ 38820080 (-) True AMCG00009470
AMCG00009472 mRNA upstream 65035 38827965 ~ 38837594 (-) True AMCG00009472
AMCG00009475 mRNA upstream 146092 38909022 ~ 38935195 (-) True AMCG00009475
AMCG00009476 mRNA upstream 249912 39012842 ~ 39013371 (-) True AMCG00009476
TU71449 other downstream 172030 38580285 ~ 38582820 (-) True G57155
TU70990 other downstream 1534774 37215960 ~ 37220076 (-) True G56800
TU70712 other downstream 2882253 35872123 ~ 35872597 (-) True G56568
TU70685 other downstream 3215040 35538887 ~ 35539810 (-) False G56546
TU71520 other upstream 72386 38835316 ~ 38837564 (-) False AMCG00009472
TU71924 other upstream 1385795 40148725 ~ 40157471 (-) False AMCG00009521
TU72548 other upstream 3906197 42669127 ~ 42673707 (-) True G58025
TU72928 other upstream 4719491 43482421 ~ 43945297 (-) True G58333
TU73015 other upstream 5226581 43989511 ~ 43995654 (-) True AMCG00009672

Expression Profile